| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3755 |
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| Symbol | |
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| ID | 5210737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4696577 |
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| End bp | 4697479 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640597351 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001278059 |
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| Protein GI | 148657854 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.366466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000145112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCACGGAT TTCTTAACAT TGATAAACCC GCCGGTATGA CATCGCACGA TGTCGTCGCC
CGGATTCGTC GCCTGAGCGG GCAACGGCGC GTCGGGCATG CAGGCACGCT CGATCCGGCA
GCGACCGGAG TGCTGGTTGT TGCGCTCGGC GGGGCAACCC GGTTGATTGA GTATGTTCAG
CATCAGACGC TGAAACAGTA TCGGGCGACC GTGTGCCTGG GTGTGACCAC GACAACCGAT
GATGCAGACG GCGAGATTAT TGCCCGGCAT CCGCTTCCGC CGCTGGACCG GGAAACGGTC
GAACGCGCAC TGGCGCCGTT GCGTGGAACG ATCTGGCAGA CGCCGCCCAT GTATGCGGCG
CTGCACCATG AGGGACGACG ACTGTATGAA CTGGCGCGCG CCGGTGTGAC GGTCGAAACG
CCGCCGCGAC AGGTGCATAT TGAGCGTCTC GACCTGGTCG CGTTCGATCC GCCGCTGCTG
ACGCTCGATG TGGTGTGCGG CAGTGGAACG TACATTCGCG CACTGGCGCG CGACCTGGGG
GCGGCGCTGG GGTGTGGCGC GCATCTCGCT GCGCTTCGCC GCACCGCAGT CGGCACGTTC
CGTATCGAAG ACGCACTACC GCTGAGGGTT CTGGAAGAGG AGGCGCAAGC CGAAGCGCTT
CCGACAAGCG ACATCGTGCG CCGACATCTT CTGCCGCCTG ACATTGCCGT CGCCGACTGG
TATGCCGTCC AGGTCGATGA AGCGAGCGCC CGACGCCTCC GGCACGGCAT GCCGCTCGTC
GCACCATCCG GCGCAGCGCC ACGCGCACGC GCTCACGCTC CTGATGGGAC GCTGATCGCG
ATTCTGCGTT TTGATGGCAC ATACTGGCGT CCGATAAAAG TATTCGATTG GACTGACGCA
TGA
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| Protein sequence | MHGFLNIDKP AGMTSHDVVA RIRRLSGQRR VGHAGTLDPA ATGVLVVALG GATRLIEYVQ
HQTLKQYRAT VCLGVTTTTD DADGEIIARH PLPPLDRETV ERALAPLRGT IWQTPPMYAA
LHHEGRRLYE LARAGVTVET PPRQVHIERL DLVAFDPPLL TLDVVCGSGT YIRALARDLG
AALGCGAHLA ALRRTAVGTF RIEDALPLRV LEEEAQAEAL PTSDIVRRHL LPPDIAVADW
YAVQVDEASA RRLRHGMPLV APSGAAPRAR AHAPDGTLIA ILRFDGTYWR PIKVFDWTDA
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