| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3751 |
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| Symbol | infB |
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| ID | 5210733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4692347 |
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| End bp | 4694536 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597347 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001278055 |
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| Protein GI | 148657850 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00372327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000243777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGTGACA TGCAAATCTC CGGTTATCAG AGCGCTATTA ATGCGCGGCA TTATATCCAG
TTCGCTGGCG GCGGGCGCGG TCCGGGCAAT CCGGGTGGCG GGCGCGGTCC GGGCAATCCG
GGCGGCGGGC GCGGTCCGGG CAGTCCAGGC GGCGGGCGCG GTCCGGGCAG TCCAGGCGGC
GGGCGCGGTC CGGGCAGTCC GGGTGGCGGG CGCGGTCCGG GCAATCCGGG TGGCGGGCGT
GGTCCAGGCG GCGGGCGCGG CGGTGGGCGC GGCGGCGACG GTCGCCGCCG TGATGAGAGT
TTTGTTGAAA ATGAAGGGGG GCGCGGCAAT CGGAGCGGAC GTACGACCAG CACCGCGACA
ACCGCGCGTA CTCCGGGCGG ATTGGCGCGT CCGACAACCA CTGTGCGCGC GCCTGTGCGC
CCGAAAGGAC CGATCGCGCT GCCAGTGACA ATGACGGTGC GCGAGTTCTC GGAGGCGACC
GGCGTCGGCG CTTCTGAGAT TTTGAAGGCG CTCCTCAAGG CTGGCGTGGT CGCTAATATC
AATCAGCAGA TCGACTATGA AACCGCTGCG GTGATTGCTG CCGATTTCGG CATCGAGACG
GTCGAATATG TGCCGCCGCA ACTGGAAGGG GTCGTTGAGA ATATCCGCGA TGTGCTGGCT
GCACAAGATC CGAAGGATAT GAAACCGCGC CCGCCGGTTG TCACCATTAT GGGTCACGTT
GACCACGGGA AGACGAAACT GCTCGACGCG ATCCGTTCAA CACGGGTGGC GGAGAGCGAG
GCTGGCGGCA TCACGCAGCA TATCGGCGCC TATCAGGTTG AATTGCACGG ACGGAAAATC
ACCTTCCTTG ATACGCCAGG GCACGAAGCG TTCACTGCAA TGCGCGCGCG CGGCGCCCAG
GTGACCGATA TCGTGGTGCT CGTGGTTGCT GCCGACGACG GGGTGATGCC GCAGACGCTG
GAGGCGATTT CACACGTGAA AGCGGCGGGC GTGCCGATGA TCGTGGCGAT CAATAAAATT
GATGCGCCCA ACGCCAATCC GGATCGCGTC CGCCAGCAAC TCGCCAACGC CGGTGTGATT
GTCGAGCAGT TCGGCGGCGA TGTTCCATCG GTTGAGGTAT CTGCCAAACT GAAGAAGAAT
ATCGATGGGT TGCTCGAGAT CATTCTGCTC GTCGCCGACC TGAATGAGTA CAAGGCGAAC
CCCAACGCGC CAGCAGTCGG AACGATTATC GAAGCCGAAA TGGATCGCAC GCGCGGTCCG
GTGGCGACCG TGCTGGTGCA GAACGGGACA CTGCGCCTGG AAGATAATGT GCTGGTTGGA
AGTACGACCG GCACGATCCG CACAATGTTC AACGATGCGG GAAAGCGTCT GCGTTTCGCC
GAACCGGCAA CGCCGGTGGT CATTCTTGGT CTGCATGATG TGCCGCAGGC GGGCGATATT
TTGCAGGTCA TGCCCGATCT GGCGGTGGCG CGCGAGATTG CGCTGCAACG ACAACGCAAG
CAGCGCCTCG AAGCCATGGC AACCTCGCGC GGCGTCAGCC TCGATGGACT GTTCAGTTCC
ATCCAGCAGG GAAAAATCAA AGAACTGAAC ATCATCCTCA AGGCGGATGT CCAGGGGTCG
ATTGGCGCAA TCGAACATGC CCTGAGCCAG CTCAACACCG ATGAGGTGCA GATCAGGATT
ATTCATCGCG GCACCGGGAC GATCACCGAG AGCGATGTGA ACCTGGCGAT TGCCTCCCAT
GCGATCATCA TCGGCTTCAA TGCCCGCCCC GATCCGGCGG CGCGCCGGCA GGCTGAACAG
TACGGCGTCG ATATCCGGTT CTACAATATC ATCTACCAGT TGACCGAAGA CATCAAAAAG
GCAATGATCG GTATGCTGGA ACCGGAGTAT CGTGAGGTGA CCGAAGGATT CGCTGAGGTG
CGCAATACCT TCCGCCTCCC AACCCGTGAG ATTGTGGCGG GTCTGTATGT GACCGAGGGG
AAGATTTCGC GCCAGTACAA TGTGCGTGTT CTGCGGAACG GCGTTGTTCT GCACGACGGG
AAGATCGCCA GTCTGAAGCG CTTCAAGGAT GATGTGCGCG AAGTGCAGGC GGGCTATGAG
TGCGGCTTGA TCGTTGAAGG GTTCAACGAT ATTACGCCCG GCGATACGAT GGAGTTCTAT
CGCAGGGAGC GTGTGGAACG AACAGTATGA
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| Protein sequence | MSDMQISGYQ SAINARHYIQ FAGGGRGPGN PGGGRGPGNP GGGRGPGSPG GGRGPGSPGG
GRGPGSPGGG RGPGNPGGGR GPGGGRGGGR GGDGRRRDES FVENEGGRGN RSGRTTSTAT
TARTPGGLAR PTTTVRAPVR PKGPIALPVT MTVREFSEAT GVGASEILKA LLKAGVVANI
NQQIDYETAA VIAADFGIET VEYVPPQLEG VVENIRDVLA AQDPKDMKPR PPVVTIMGHV
DHGKTKLLDA IRSTRVAESE AGGITQHIGA YQVELHGRKI TFLDTPGHEA FTAMRARGAQ
VTDIVVLVVA ADDGVMPQTL EAISHVKAAG VPMIVAINKI DAPNANPDRV RQQLANAGVI
VEQFGGDVPS VEVSAKLKKN IDGLLEIILL VADLNEYKAN PNAPAVGTII EAEMDRTRGP
VATVLVQNGT LRLEDNVLVG STTGTIRTMF NDAGKRLRFA EPATPVVILG LHDVPQAGDI
LQVMPDLAVA REIALQRQRK QRLEAMATSR GVSLDGLFSS IQQGKIKELN IILKADVQGS
IGAIEHALSQ LNTDEVQIRI IHRGTGTITE SDVNLAIASH AIIIGFNARP DPAARRQAEQ
YGVDIRFYNI IYQLTEDIKK AMIGMLEPEY REVTEGFAEV RNTFRLPTRE IVAGLYVTEG
KISRQYNVRV LRNGVVLHDG KIASLKRFKD DVREVQAGYE CGLIVEGFND ITPGDTMEFY
RRERVERTV
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