Gene RoseRS_3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3747 
Symbol 
ID5210729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4687791 
End bp4688456 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content57% 
IMG OID640597343 
Productabortive infection protein 
Protein accessionYP_001278051 
Protein GI148657846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.302085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000152391 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCGCC AGATACCCGG TGAACGACGA ACCTCGAAGC CGCGCACCGA TCCGGTGAAC 
TGGCTGCTGG GCGAATCATT GTCGTTCGAC TGGAATATCG TTGCGATCAG CGTTGTCAGC
GTCTCACTGC TGGTATTTGA CAGATATTAC AGCATGACGC CGTATAAGTA CTGGGATCGG
GTCATCCTCT ACCTGTTTGT GCCACTGTTC GTCATCATCA TTATCTGTCG CGAACACCCA
CGCATTTACG GCTTTACCGT TGGCGACTGG AAAGCTGGCA TTGTTCTCAC GCTGCTCGGC
ATTGGCGTCA TGACGCCGCT TCTGTACGTC TTCGGGCGGC ACGATCCGGC GCTCAACGCC
TACTATCGCG GGCTAACGAC GGGTTTGCCG TGGACAACCC TGCTTGATCT GATCGGCTGG
GAGTTTCTGT TCCGTGGATG GATCCTGTTC GGCTACGCGC GTCGATTCGG TCCCGAAGCG
CTGTGGCTCC AGTCTGTTCC GTTCGTCCTG GTGCATATCG GTAAGCCGGA ACTGGAGACC
TTCTTCACAA TCATTGGCGG GTTTGGCTTC GGCTGGCTGG CGTGGCGCAC GAAGTCGTTC
GTCTGGCCCT TCCTCGTTCA CTGGTTCGTG GCAACGTTTC TCATCCTCGT TGCTGCATCA
CGATGA
 
Protein sequence
MQRQIPGERR TSKPRTDPVN WLLGESLSFD WNIVAISVVS VSLLVFDRYY SMTPYKYWDR 
VILYLFVPLF VIIIICREHP RIYGFTVGDW KAGIVLTLLG IGVMTPLLYV FGRHDPALNA
YYRGLTTGLP WTTLLDLIGW EFLFRGWILF GYARRFGPEA LWLQSVPFVL VHIGKPELET
FFTIIGGFGF GWLAWRTKSF VWPFLVHWFV ATFLILVAAS R