Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3747 |
Symbol | |
ID | 5210729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4687791 |
End bp | 4688456 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640597343 |
Product | abortive infection protein |
Protein accession | YP_001278051 |
Protein GI | 148657846 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.302085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000152391 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGCGCC AGATACCCGG TGAACGACGA ACCTCGAAGC CGCGCACCGA TCCGGTGAAC TGGCTGCTGG GCGAATCATT GTCGTTCGAC TGGAATATCG TTGCGATCAG CGTTGTCAGC GTCTCACTGC TGGTATTTGA CAGATATTAC AGCATGACGC CGTATAAGTA CTGGGATCGG GTCATCCTCT ACCTGTTTGT GCCACTGTTC GTCATCATCA TTATCTGTCG CGAACACCCA CGCATTTACG GCTTTACCGT TGGCGACTGG AAAGCTGGCA TTGTTCTCAC GCTGCTCGGC ATTGGCGTCA TGACGCCGCT TCTGTACGTC TTCGGGCGGC ACGATCCGGC GCTCAACGCC TACTATCGCG GGCTAACGAC GGGTTTGCCG TGGACAACCC TGCTTGATCT GATCGGCTGG GAGTTTCTGT TCCGTGGATG GATCCTGTTC GGCTACGCGC GTCGATTCGG TCCCGAAGCG CTGTGGCTCC AGTCTGTTCC GTTCGTCCTG GTGCATATCG GTAAGCCGGA ACTGGAGACC TTCTTCACAA TCATTGGCGG GTTTGGCTTC GGCTGGCTGG CGTGGCGCAC GAAGTCGTTC GTCTGGCCCT TCCTCGTTCA CTGGTTCGTG GCAACGTTTC TCATCCTCGT TGCTGCATCA CGATGA
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Protein sequence | MQRQIPGERR TSKPRTDPVN WLLGESLSFD WNIVAISVVS VSLLVFDRYY SMTPYKYWDR VILYLFVPLF VIIIICREHP RIYGFTVGDW KAGIVLTLLG IGVMTPLLYV FGRHDPALNA YYRGLTTGLP WTTLLDLIGW EFLFRGWILF GYARRFGPEA LWLQSVPFVL VHIGKPELET FFTIIGGFGF GWLAWRTKSF VWPFLVHWFV ATFLILVAAS R
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