Gene RoseRS_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3745 
Symbol 
ID5210727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4685462 
End bp4686451 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content63% 
IMG OID640597341 
Productalcohol dehydrogenase 
Protein accessionYP_001278049 
Protein GI148657844 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00017214 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGCTA TTCTGTTCGA TGCTCCCGGC AGCCCGGAAG TTTTACGGTA TGACGATGCG 
CCTGACCCGA CCCCCGGCGC TGACGAGGTG TTGGTGCGGG TGCGCGCCAC GGCGGTTAAT
CGCGCCGATC TGCTCCAGCG ACGCGGGGTG TATGCACCGC CTCCGGGTGC GTCACCCATT
CTTGGGCTGG AACTCGCCGG CGAGGTGCTG ACGCCTGCCG GTCCTTGGCG CGTCGGTGAT
CGGGTGATGG CTGTGGTAAC TGGCGGCGGC TACGCCGAAC TGGCGGTCGT GCCCGTCGGC
ATGGTCATGC GTATACCGGA TTCCCTTTCG TTTGAGGAAG CGGGCGCCAT TCCGGAAGCC
TTCCTGACTG CGTTTCTCAA CCTGTTCACG CTAGGGCGGT TGCAGGCGGG GGAGACGGTG
CTGATCCATG CTGGCGCCAG CGGCGTCGGA ACCGCAGCCA TCCAGCTGGC GCGTGTTGCC
GGCGCACGTG TCTTTGCCAC TGCCGGCTCA CCGGAAAAAT GCGCGCTCTG TCGTGAACTC
GGCGCAGAGC TGACAATCAA TTACCGCGAA GAGTCGTTCG CGGCGCGAGC ACTCGATGCA
ACCGGCGGTC GCGGCGTTGA TCTGGTGCTG GATTTCGTTG GCGCTCCCTA CTGGCAGCAG
AATACTGCGG CGTTGGCGCT CGATGGACGA TTGCAGTTGA TCGGATTTCT GGGAGGATCG
GCGGGGCAGA TCGACCTGGG ACCGATCCTG GCAAAACGAT TGCATGTGAC CGGCACAACC
CTGCGTCGTA TGCCTTTGCC GCAGAAAACC GCTCTCACCG CTGATTTCGT CGCATTCGCC
CATGATCGCC TGGCGAGCGG CGAGTTGCGT CCGGTTATCG ATACCGTCTA CCCGTTGCAC
CAGGCTGCAG AAGCGCATCG TGTCATGGAA GCGAACCGCA ACGCTGGAAA ACTCGTCCTG
CGCGTGGAAG AGTCGGTTAC CCAACCGTAA
 
Protein sequence
MKAILFDAPG SPEVLRYDDA PDPTPGADEV LVRVRATAVN RADLLQRRGV YAPPPGASPI 
LGLELAGEVL TPAGPWRVGD RVMAVVTGGG YAELAVVPVG MVMRIPDSLS FEEAGAIPEA
FLTAFLNLFT LGRLQAGETV LIHAGASGVG TAAIQLARVA GARVFATAGS PEKCALCREL
GAELTINYRE ESFAARALDA TGGRGVDLVL DFVGAPYWQQ NTAALALDGR LQLIGFLGGS
AGQIDLGPIL AKRLHVTGTT LRRMPLPQKT ALTADFVAFA HDRLASGELR PVIDTVYPLH
QAAEAHRVME ANRNAGKLVL RVEESVTQP