Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3745 |
Symbol | |
ID | 5210727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4685462 |
End bp | 4686451 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597341 |
Product | alcohol dehydrogenase |
Protein accession | YP_001278049 |
Protein GI | 148657844 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00017214 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAGCTA TTCTGTTCGA TGCTCCCGGC AGCCCGGAAG TTTTACGGTA TGACGATGCG CCTGACCCGA CCCCCGGCGC TGACGAGGTG TTGGTGCGGG TGCGCGCCAC GGCGGTTAAT CGCGCCGATC TGCTCCAGCG ACGCGGGGTG TATGCACCGC CTCCGGGTGC GTCACCCATT CTTGGGCTGG AACTCGCCGG CGAGGTGCTG ACGCCTGCCG GTCCTTGGCG CGTCGGTGAT CGGGTGATGG CTGTGGTAAC TGGCGGCGGC TACGCCGAAC TGGCGGTCGT GCCCGTCGGC ATGGTCATGC GTATACCGGA TTCCCTTTCG TTTGAGGAAG CGGGCGCCAT TCCGGAAGCC TTCCTGACTG CGTTTCTCAA CCTGTTCACG CTAGGGCGGT TGCAGGCGGG GGAGACGGTG CTGATCCATG CTGGCGCCAG CGGCGTCGGA ACCGCAGCCA TCCAGCTGGC GCGTGTTGCC GGCGCACGTG TCTTTGCCAC TGCCGGCTCA CCGGAAAAAT GCGCGCTCTG TCGTGAACTC GGCGCAGAGC TGACAATCAA TTACCGCGAA GAGTCGTTCG CGGCGCGAGC ACTCGATGCA ACCGGCGGTC GCGGCGTTGA TCTGGTGCTG GATTTCGTTG GCGCTCCCTA CTGGCAGCAG AATACTGCGG CGTTGGCGCT CGATGGACGA TTGCAGTTGA TCGGATTTCT GGGAGGATCG GCGGGGCAGA TCGACCTGGG ACCGATCCTG GCAAAACGAT TGCATGTGAC CGGCACAACC CTGCGTCGTA TGCCTTTGCC GCAGAAAACC GCTCTCACCG CTGATTTCGT CGCATTCGCC CATGATCGCC TGGCGAGCGG CGAGTTGCGT CCGGTTATCG ATACCGTCTA CCCGTTGCAC CAGGCTGCAG AAGCGCATCG TGTCATGGAA GCGAACCGCA ACGCTGGAAA ACTCGTCCTG CGCGTGGAAG AGTCGGTTAC CCAACCGTAA
|
Protein sequence | MKAILFDAPG SPEVLRYDDA PDPTPGADEV LVRVRATAVN RADLLQRRGV YAPPPGASPI LGLELAGEVL TPAGPWRVGD RVMAVVTGGG YAELAVVPVG MVMRIPDSLS FEEAGAIPEA FLTAFLNLFT LGRLQAGETV LIHAGASGVG TAAIQLARVA GARVFATAGS PEKCALCREL GAELTINYRE ESFAARALDA TGGRGVDLVL DFVGAPYWQQ NTAALALDGR LQLIGFLGGS AGQIDLGPIL AKRLHVTGTT LRRMPLPQKT ALTADFVAFA HDRLASGELR PVIDTVYPLH QAAEAHRVME ANRNAGKLVL RVEESVTQP
|
| |