Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3718 |
Symbol | |
ID | 5210699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4656143 |
End bp | 4656769 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597313 |
Product | hypothetical protein |
Protein accession | YP_001278022 |
Protein GI | 148657817 |
COG category | [S] Function unknown |
COG ID | [COG4347] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0824979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00974896 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATACGCC TGACACACTG GCTCTTCGAG TTCATTCTGC GCACGCCGAT TATCTTCTGG TGCTGCGTCG TCGCTAACCT GATCGGCGCG GTGTGGGGCG CAGCGGTCTG GTATGGTCCG ATGCTGGCGG CATCGCCGCT GTGGGCATGG CCCTTCATTC CCGATTGCCC ACTCGCAGCG TTTCTCGGCA CAATTGCGCT CTTTGGCATG CGTGCAGGAC GACGCTGGAC TCTCTTCTAT ACGCTGACAG CGTTCGCGTG CATACACTAC GGCATCTGGA CGCTGGTATT CTGGTTGCGT CAGTGGACAG GATCAGGCGT GATCGATCCG TTCGAGATGG TGCTGTTCGT CACCCATATT GGTTTGCTGT GCGAGGGGGT ACTGTTCGCC ACGCGCCTGG GCGATGTATC GTTTCCGCAA CGACTCACTG TCATTGGCTG GTTTGTCCTG GCATTTGGCG TCGATTACGG GTTGGGGTAT CACCCGCCGC TGGCGAGCCA CGTGACGTTC GATTTCATCA TGTGGTTAAC GGTTGCGCTC ACGGGCGGGT TGAGCATCGC GTTGCTGGCG CTGCCGCGCA CCGTCGCACA ACCGGCGCGC CTGTCGACCA CGACGGTCGA GGGATAG
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Protein sequence | MIRLTHWLFE FILRTPIIFW CCVVANLIGA VWGAAVWYGP MLAASPLWAW PFIPDCPLAA FLGTIALFGM RAGRRWTLFY TLTAFACIHY GIWTLVFWLR QWTGSGVIDP FEMVLFVTHI GLLCEGVLFA TRLGDVSFPQ RLTVIGWFVL AFGVDYGLGY HPPLASHVTF DFIMWLTVAL TGGLSIALLA LPRTVAQPAR LSTTTVEG
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