Gene RoseRS_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3718 
Symbol 
ID5210699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4656143 
End bp4656769 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content60% 
IMG OID640597313 
Producthypothetical protein 
Protein accessionYP_001278022 
Protein GI148657817 
COG category[S] Function unknown 
COG ID[COG4347] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0824979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00974896 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATACGCC TGACACACTG GCTCTTCGAG TTCATTCTGC GCACGCCGAT TATCTTCTGG 
TGCTGCGTCG TCGCTAACCT GATCGGCGCG GTGTGGGGCG CAGCGGTCTG GTATGGTCCG
ATGCTGGCGG CATCGCCGCT GTGGGCATGG CCCTTCATTC CCGATTGCCC ACTCGCAGCG
TTTCTCGGCA CAATTGCGCT CTTTGGCATG CGTGCAGGAC GACGCTGGAC TCTCTTCTAT
ACGCTGACAG CGTTCGCGTG CATACACTAC GGCATCTGGA CGCTGGTATT CTGGTTGCGT
CAGTGGACAG GATCAGGCGT GATCGATCCG TTCGAGATGG TGCTGTTCGT CACCCATATT
GGTTTGCTGT GCGAGGGGGT ACTGTTCGCC ACGCGCCTGG GCGATGTATC GTTTCCGCAA
CGACTCACTG TCATTGGCTG GTTTGTCCTG GCATTTGGCG TCGATTACGG GTTGGGGTAT
CACCCGCCGC TGGCGAGCCA CGTGACGTTC GATTTCATCA TGTGGTTAAC GGTTGCGCTC
ACGGGCGGGT TGAGCATCGC GTTGCTGGCG CTGCCGCGCA CCGTCGCACA ACCGGCGCGC
CTGTCGACCA CGACGGTCGA GGGATAG
 
Protein sequence
MIRLTHWLFE FILRTPIIFW CCVVANLIGA VWGAAVWYGP MLAASPLWAW PFIPDCPLAA 
FLGTIALFGM RAGRRWTLFY TLTAFACIHY GIWTLVFWLR QWTGSGVIDP FEMVLFVTHI
GLLCEGVLFA TRLGDVSFPQ RLTVIGWFVL AFGVDYGLGY HPPLASHVTF DFIMWLTVAL
TGGLSIALLA LPRTVAQPAR LSTTTVEG