Gene RoseRS_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3714 
Symbol 
ID5210693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4649284 
End bp4650453 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content62% 
IMG OID640597307 
Product2-alkenal reductase 
Protein accessionYP_001278018 
Protein GI148657813 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00887093 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAACC GCTCCGGCGA GAAACGTTCC CCCTGTGTGA TCTATGCGCT CCTTGGCGGA 
TTGAGCCTGG TGAGCGGCGT TGTCGGCACA CTTGTCGGCG GTGCGTTGAT CTGGTTCTTT
GTTGCGCGCC CGATTGCCGA TCAAACAGCG CAGACGACCG TACCAGCCAC GCTCCCCTCC
ACCCTTCTCC CATCTCCAAC ACCGCTGGTC GTCGCCACGG ACGATCCGGT GCGCACGGCG
CCGGCGCGTA TCGCGCGCGA GGCAGGACCA TCGGTGGTGA CGGTGGTGTC GCAGTTGCCG
CCGCAGGTCG GTTTCTTCGG CACATTCCAA CCGCCGCCAG CGCGTGGTTC AGGAGTGATT
ATCGATCCGC GCGGGTACAT TATCACCAAC CACCACGTGG TTGAAGGCGC GCGGCAGTTG
TACGTCATTC TTGCCGACGG ACGACAGCGC CCGGCGCAAT TGATCGGGAG CGACTACCCG
TTCAGCGATC TGGCGCTGAT CAAGATCGAA GGCGATACCT ATCCCGCAGC CCGGTTGGGC
GACTCTGACG CAGTCCAGGC AGGCGATTGG GTGGTTGCCA TCGGCAGCGC CCTGGGCGAC
CTGCGCAACT CGGTAACGGT CGGTGTGGTC AGCGGGCTTG GACGGTCGCT GCAAACCCGC
GACGTCGTAC TGGACGACCT GATCCAGACG GATGCAACTA TCAACCGCGG TAACTCTGGC
GGTCCATTGT TGAACCTGGA TGGCGAGGTG ATCGGGATCA ATACGGCGAT CATACGCGGC
GGCGCCGAAC AGGCGGAAGG GATCGGGTTC GCCATTCCCA GTAACACCGT GCGCTATGTC
GCCGATCAAC TGATAACACG CGGCAGGGTG GCACGTCCAT ACCTGCCGAT CGAATTCGTA
CCGATTACGC CGCGTCTGGC GGCGTGGTAC AACCTGCCGG TCGATTACGG TCTCTTTATT
CAGGCGGTCA GGCGTGGATC GGCGCTGGCG CAGGCTGGTG TGCAACCGGG TGATATCCTG
TTATCACTCG GCGGTCAGCG CATCGATGAA GCCCATCCGT TGCTGCGTGT GCTGGCGCGA
CATCAGGTTG GCGAAGAGGT CGAGATCGAG ATCTGGCGTG ACAACGCCAT ACAGACAATA
CGGATCACGC TGGAAGAATT GCCCCGCTGA
 
Protein sequence
MENRSGEKRS PCVIYALLGG LSLVSGVVGT LVGGALIWFF VARPIADQTA QTTVPATLPS 
TLLPSPTPLV VATDDPVRTA PARIAREAGP SVVTVVSQLP PQVGFFGTFQ PPPARGSGVI
IDPRGYIITN HHVVEGARQL YVILADGRQR PAQLIGSDYP FSDLALIKIE GDTYPAARLG
DSDAVQAGDW VVAIGSALGD LRNSVTVGVV SGLGRSLQTR DVVLDDLIQT DATINRGNSG
GPLLNLDGEV IGINTAIIRG GAEQAEGIGF AIPSNTVRYV ADQLITRGRV ARPYLPIEFV
PITPRLAAWY NLPVDYGLFI QAVRRGSALA QAGVQPGDIL LSLGGQRIDE AHPLLRVLAR
HQVGEEVEIE IWRDNAIQTI RITLEELPR