Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3701 |
Symbol | |
ID | 5210680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4627465 |
End bp | 4628868 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597295 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001278006 |
Protein GI | 148657801 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000590991 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0343831 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGTTCG ACTCATTTCG CTTTCATCCG CAGATTACCG CCGGTATTCG CGACCTCGGA TACCATACGC CGACTCCTAT CCAGGAACAG GTTATTCCCC ACGCTCTGGA CGGGCGTGAT GTCATTGGCA TCGCGCAAAC CGGCACCGGC AAGACGGCAG CGTTCGTACT GCCCATCCTG CAACGCCTCA TGCGGGGACC GCGCGGTCGT GTGCGTGCCA TGATCGTCAC GCCGACCCGT GAACTGGCGG AGCAGATTCA GGGGGTGATC GAGGCGCTCG GCAAATACAC CGGGCTTCGC AGCGTCACCC TGTACGGCGG CGTCGGGTAT CAGGGGCAGA TCCAGCGGCT GCGACGCGGC GTCGAGATTG CCGTCGTTTG TCCGGGGCGT TTGCTCGACC ATCTGGAACG TGGGACGCTA ACGCTCGAGC ATCTGGATAT GCTGATCCTC GATGAAGCCG ATCAGATGTT CGATATGGGA TTTTTGCCCG ATGTCCGCCG AATTCTGCGC CTTGCGCCGG CGCAGCGTCA GACGATGCTT TTCTCGGCGA CAATGCCCGA CGCGATTCGC GCACTGGCGC GCGAGGCGTT GCGTGAACCG CAGACGATTC AGATCGGGCG CAGTGCGCCG GTTTCCACTG TCACCCACGC GATCTATCCG GTTGCCGAGC ACCTGAAGAC GGCACTGTTG ATCGAGTTGC TGCGCCACAC CGACACCGGA TCGGTGCTGA TTTTCACCCG TACGAAGCAC CGCGCGCAAC ATCTCAGCGA TACACTGGCG CGCATGGGGT ACCGGGCGAC AGCATTGCAG GGCAATATGT CGCAGAACCG TCGCCAGGCG GCGCTTGACG GGTTCCGCAG CGGCAGGTAT CAGATCCTGG TCGCAACTGA TATTGCCGCG CGCGGCATCG ATGTGGCGCA TATTTCGCAC GTCATCAACT ACGATATGCC GCAAACCGCC GAGGCGTACA CCCATCGCAT CGGGCGCACC GGGCGTGCAG CGCGCACCGG GGACGCATTT ACGCTGGTAA CCCGTAGCGA TACAGGAATG GTGCGCGCTA TCGAGCGCCT GATCGGCGAG CCGTTGAAAC GCGAAACCGT GCCCGGCTTC GATTATCACG CGGCAGCGCC GGCACACGAT GCCCGGTCTG ATCACGCACC CCGTCACCAC GCAATGCCGC GCCACTATGA GCCACATTCC CAGGATGAGC GGGACAATCG GGCGCCGCGC CGCCACGATG CGCAAGAGCG GCGATCTGAT ACCGCGCCGC GCCGTCGCGA TGTGCAAGAG TGGCGATCTG ATGCCGCGCC GAACCGCCAC AAACCCCGCT CCCGCGATAC GTCTGCGCGT TCAACCCGCG CCGATCGCTC TGATCGAACG GTTTCGGGGC GGCGACGACC GTAA
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Protein sequence | MSFDSFRFHP QITAGIRDLG YHTPTPIQEQ VIPHALDGRD VIGIAQTGTG KTAAFVLPIL QRLMRGPRGR VRAMIVTPTR ELAEQIQGVI EALGKYTGLR SVTLYGGVGY QGQIQRLRRG VEIAVVCPGR LLDHLERGTL TLEHLDMLIL DEADQMFDMG FLPDVRRILR LAPAQRQTML FSATMPDAIR ALAREALREP QTIQIGRSAP VSTVTHAIYP VAEHLKTALL IELLRHTDTG SVLIFTRTKH RAQHLSDTLA RMGYRATALQ GNMSQNRRQA ALDGFRSGRY QILVATDIAA RGIDVAHISH VINYDMPQTA EAYTHRIGRT GRAARTGDAF TLVTRSDTGM VRAIERLIGE PLKRETVPGF DYHAAAPAHD ARSDHAPRHH AMPRHYEPHS QDERDNRAPR RHDAQERRSD TAPRRRDVQE WRSDAAPNRH KPRSRDTSAR STRADRSDRT VSGRRRP
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