Gene RoseRS_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3701 
Symbol 
ID5210680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4627465 
End bp4628868 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content63% 
IMG OID640597295 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001278006 
Protein GI148657801 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000590991 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0343831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTTCG ACTCATTTCG CTTTCATCCG CAGATTACCG CCGGTATTCG CGACCTCGGA 
TACCATACGC CGACTCCTAT CCAGGAACAG GTTATTCCCC ACGCTCTGGA CGGGCGTGAT
GTCATTGGCA TCGCGCAAAC CGGCACCGGC AAGACGGCAG CGTTCGTACT GCCCATCCTG
CAACGCCTCA TGCGGGGACC GCGCGGTCGT GTGCGTGCCA TGATCGTCAC GCCGACCCGT
GAACTGGCGG AGCAGATTCA GGGGGTGATC GAGGCGCTCG GCAAATACAC CGGGCTTCGC
AGCGTCACCC TGTACGGCGG CGTCGGGTAT CAGGGGCAGA TCCAGCGGCT GCGACGCGGC
GTCGAGATTG CCGTCGTTTG TCCGGGGCGT TTGCTCGACC ATCTGGAACG TGGGACGCTA
ACGCTCGAGC ATCTGGATAT GCTGATCCTC GATGAAGCCG ATCAGATGTT CGATATGGGA
TTTTTGCCCG ATGTCCGCCG AATTCTGCGC CTTGCGCCGG CGCAGCGTCA GACGATGCTT
TTCTCGGCGA CAATGCCCGA CGCGATTCGC GCACTGGCGC GCGAGGCGTT GCGTGAACCG
CAGACGATTC AGATCGGGCG CAGTGCGCCG GTTTCCACTG TCACCCACGC GATCTATCCG
GTTGCCGAGC ACCTGAAGAC GGCACTGTTG ATCGAGTTGC TGCGCCACAC CGACACCGGA
TCGGTGCTGA TTTTCACCCG TACGAAGCAC CGCGCGCAAC ATCTCAGCGA TACACTGGCG
CGCATGGGGT ACCGGGCGAC AGCATTGCAG GGCAATATGT CGCAGAACCG TCGCCAGGCG
GCGCTTGACG GGTTCCGCAG CGGCAGGTAT CAGATCCTGG TCGCAACTGA TATTGCCGCG
CGCGGCATCG ATGTGGCGCA TATTTCGCAC GTCATCAACT ACGATATGCC GCAAACCGCC
GAGGCGTACA CCCATCGCAT CGGGCGCACC GGGCGTGCAG CGCGCACCGG GGACGCATTT
ACGCTGGTAA CCCGTAGCGA TACAGGAATG GTGCGCGCTA TCGAGCGCCT GATCGGCGAG
CCGTTGAAAC GCGAAACCGT GCCCGGCTTC GATTATCACG CGGCAGCGCC GGCACACGAT
GCCCGGTCTG ATCACGCACC CCGTCACCAC GCAATGCCGC GCCACTATGA GCCACATTCC
CAGGATGAGC GGGACAATCG GGCGCCGCGC CGCCACGATG CGCAAGAGCG GCGATCTGAT
ACCGCGCCGC GCCGTCGCGA TGTGCAAGAG TGGCGATCTG ATGCCGCGCC GAACCGCCAC
AAACCCCGCT CCCGCGATAC GTCTGCGCGT TCAACCCGCG CCGATCGCTC TGATCGAACG
GTTTCGGGGC GGCGACGACC GTAA
 
Protein sequence
MSFDSFRFHP QITAGIRDLG YHTPTPIQEQ VIPHALDGRD VIGIAQTGTG KTAAFVLPIL 
QRLMRGPRGR VRAMIVTPTR ELAEQIQGVI EALGKYTGLR SVTLYGGVGY QGQIQRLRRG
VEIAVVCPGR LLDHLERGTL TLEHLDMLIL DEADQMFDMG FLPDVRRILR LAPAQRQTML
FSATMPDAIR ALAREALREP QTIQIGRSAP VSTVTHAIYP VAEHLKTALL IELLRHTDTG
SVLIFTRTKH RAQHLSDTLA RMGYRATALQ GNMSQNRRQA ALDGFRSGRY QILVATDIAA
RGIDVAHISH VINYDMPQTA EAYTHRIGRT GRAARTGDAF TLVTRSDTGM VRAIERLIGE
PLKRETVPGF DYHAAAPAHD ARSDHAPRHH AMPRHYEPHS QDERDNRAPR RHDAQERRSD
TAPRRRDVQE WRSDAAPNRH KPRSRDTSAR STRADRSDRT VSGRRRP