| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3696 |
|---|
| Symbol | |
|---|
| ID | 5210675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4622343 |
|---|
| End bp | 4623248 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640597290 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001278001 |
|---|
| Protein GI | 148657796 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.657474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0341375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATG TCGTTACCCT CGGCGAGTGC ATGGCTGTTC TGTACCCGCC CGATCCTGTC
TCGCTGGACG AAGCCCGCAC CCTGCTGATC GACATCGGCG GCGCGGAGGC GAACCTTGCC
ATCGCGCTCT GCCGACTCGG TCACAGCGCG CGTTTCATCA GTCGGGTCGG CGATGATCCG
TTTGGGAGGC GGGTGCGCGC TGTGCTATCT ACCGAGGGAG TCGATACATC CGCGCTTCTG
ATCGATCCCG AAGCGCCAAC CGGGGTCTTC TTCCGCGAAT GGCTCGCCGA TGGCGCGCGA
CGTGTCTACT ATTATCGCCG CAACTCAGCC GCGAGTCGAA TCACGCCGGA CGATCTCACG
CCAGCACAGT TCAACGGCGC GCGCATTGTT CACCTGACCG GCATCACGCC TGCGCTGAGC
GCGTCCTGCG CTGCCGCCTG CGAGCGCGCG ATTGAACTGG CGCGCGCTGC CGGTGCGCTG
ATCTCCTTCG ACCCCAATTT CCGTCCACGA TTATGGAGCG CATCACAGGC GCGCGATACG
CTCCTGCCGT TGATGCGCGC CGCCGATATC CTGTTGATCG GGCATGAAGA TGCGCAGGCG
CTCCTGGAAG TTGACAACGA CGACGACGCG CTGATGGCGG CGGCAGCGCT GGGTGCACAG
GTCGTGGTGC TGAAATGCGC CGAACGCGGC GCACGTGCGC TGGCGAACGG GCAGCACGTC
ACGACGCCAG CTTACCCGGT CCGCCAGGTG GTTGATCCGG TCGGCGCTGG TGACGGCTTC
GATGCCGGTT TTCTTGCGGG ATGGCTGCGC GGATGGAGTA TGTCCGATTC GCTGGCGCTC
GGAGCGCGCA TCGGCGCGGC TGCGGTCGAA ACATTGGGCG ATTACGTCGG ATATCCGCGC
GTCTGA
|
|---|
| Protein sequence | MSDVVTLGEC MAVLYPPDPV SLDEARTLLI DIGGAEANLA IALCRLGHSA RFISRVGDDP
FGRRVRAVLS TEGVDTSALL IDPEAPTGVF FREWLADGAR RVYYYRRNSA ASRITPDDLT
PAQFNGARIV HLTGITPALS ASCAAACERA IELARAAGAL ISFDPNFRPR LWSASQARDT
LLPLMRAADI LLIGHEDAQA LLEVDNDDDA LMAAAALGAQ VVVLKCAERG ARALANGQHV
TTPAYPVRQV VDPVGAGDGF DAGFLAGWLR GWSMSDSLAL GARIGAAAVE TLGDYVGYPR
V
|
|---|
| |