| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3691 |
|---|
| Symbol | |
|---|
| ID | 5210670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4616890 |
|---|
| End bp | 4617831 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640597285 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001277996 |
|---|
| Protein GI | 148657791 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.454673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0109558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACCAC ACAAACCCGG ATTATCCTGC CACCTGACAC ACAAAGCAAA CCTCAGGCAG
ACGCGTTACG GATGGTTGAG GTTGACTCCC GCATACTCGG TTCATCTGGT TCAAGAAATA
CTTTCTCACA TAGCGCCACA GGATGCCATT GTCCTCGATC CTTTTTGCGG GACAGGGACA
ACTGCCCTTG TTTGTGCAGA AAAAGGCATC ACTGTCGATA CGACCGATAT CAATCCCTTT
CTCCTCTGGC TGACAAAAGT TAAGACTGCT CCATATAGTT CGGAAGATAT TGCGGAACTT
CAATCTGCCG CTCAGATTAT TTCTGAATCT ATCACTCTCT CCAATTCTGC TGGTGTCTGG
ATTCCGCCAA TTCACCAGAT TGAGCGATGG TGGGATAGTG ATGTTCTTCA AATAATTGGT
AACATGATGG GTATGATCAA TAAAATGGGC GAGATTTACC CGGAAAAGGT TATAGATTTG
CTCAAGATAG CGTTTTGCAG AGTTATAATC ACACATTCGA GCGCCAGTTT CGATCACCAG
TCGATGTCCT TCAAGCAAAA GATAAACGCG CCGCTTTTTT ATGATGTCGC GGATGAGGTG
AGGGCGACGT GGGAAGTTGC GGTCAGCGAG ATCGTTTCGT CTGCCCGCAG CGACATACGT
GCGACGCCTG GGATTTTTCT CTGCGATGCC AGAGACCTTT CAGCATTATT GCCACATCAT
TACTATACGT GTGTGATTAC CTCACCGCCA TACCCAAATC GAATGAGCTA CATTCGCGAG
TTGCGTCCGT ACATGTACTG GCTCAGTTAC CTCCGTGATG GTAGAGAAGC CGGCGAACTT
GACTGGAAAG CCATCGGCGG CACCTGGGGA ATCGCAACCA GCAGAGTCGG CAAGTGGTCT
CCTTCAGAGG GCGATCAGAA AACCGGATTT GTGGTATCGT GA
|
|---|
| Protein sequence | MIPHKPGLSC HLTHKANLRQ TRYGWLRLTP AYSVHLVQEI LSHIAPQDAI VLDPFCGTGT
TALVCAEKGI TVDTTDINPF LLWLTKVKTA PYSSEDIAEL QSAAQIISES ITLSNSAGVW
IPPIHQIERW WDSDVLQIIG NMMGMINKMG EIYPEKVIDL LKIAFCRVII THSSASFDHQ
SMSFKQKINA PLFYDVADEV RATWEVAVSE IVSSARSDIR ATPGIFLCDA RDLSALLPHH
YYTCVITSPP YPNRMSYIRE LRPYMYWLSY LRDGREAGEL DWKAIGGTWG IATSRVGKWS
PSEGDQKTGF VVS
|
|---|
| |