Gene RoseRS_3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3677 
Symbol 
ID5210656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4606782 
End bp4607285 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID640597271 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_001277982 
Protein GI148657777 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00974896 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAATAG AGCAAAAAGC GGGCGATATG GGAATCGTCA CTGCATCGCT CGAACAGCTG 
GTCAACTGGA GCCGATCGAG CGCGATGTGG CCCCTGCTGT TTGGTCTGGC GTGCTGCGCC
ATCGAGATGA TGGGCGCGCA GGGCGCCAAT TACGACCTGT CGCGTTTCGG GATGGAGATC
AACCGGGCAT CACCGCGTCA GGCGGATCTC ATGATCGTCG CCGGGCGCGT CTCGCGGAAA
ATGGCGCCGG TCGTGCGCCG CCTGTACGAT CAGATGGCAG ACCCGAAATG GGTGATCGCC
ATGGGAGATT GTGCGGCGTG CGGCGGGGTG TTCAACAATT ACGCGATCGT GCAGGGTGTC
GATGAAATCG TTCCGGTCGA TGTCTACGTC GCCGGGTGCC CGCCGCGTCC CGAAGCGCTG
ATCGATGGCA TTATCCATCT GCACGAGAAG GTGAAGCGCA TGCGTCTCGA TGGCGAATTG
CGCGAGCCGG TTCGCCTCTC GTAG
 
Protein sequence
MGIEQKAGDM GIVTASLEQL VNWSRSSAMW PLLFGLACCA IEMMGAQGAN YDLSRFGMEI 
NRASPRQADL MIVAGRVSRK MAPVVRRLYD QMADPKWVIA MGDCAACGGV FNNYAIVQGV
DEIVPVDVYV AGCPPRPEAL IDGIIHLHEK VKRMRLDGEL REPVRLS