| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3642 |
|---|
| Symbol | |
|---|
| ID | 5210620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4557368 |
|---|
| End bp | 4558603 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640597235 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_001277947 |
|---|
| Protein GI | 148657742 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTTG TCGTATCGCT CGAACATCAC TTTGATCGCA CGCCAGACGG CGTTGTCTGG
ACACAGACAC AATTCCCGTA CCGTTTCTGG CAACGCTATC TGGAGGTGTT CGACCAGGTG
CAGGTCGTTG CGCGGGTGCG TGATGTGCGC AAAGCTGCGC CCGACTGGCA GCGCGCCGAT
GGGCGTTCAG TCTCATTTGC CGCCATTCCC GATTACCTGG GACCGCGCCA GTATCTGATG
CGCATCCGTC AGGTGCGCAC GGCTGCGCGT GGCGCAATCG GCGCGGAGGA TGCTGTGATT
CTGCGTGTCA GTTCGCAGAT CGCCGATGTG ATCTATCCGT TGCTCCGGCG CCAGGCGCGT
CCGTATGGCG TCGAGGTTGT CAGCGACCCA TATGATGTGT TTGCGCCCGG TTCGGTCAGG
CACCCGCTGC GCCCATTCTT TCGCTGGTTA TTCCCATATC GCCTGCGGCA GCACTGCGCC
AACGCAGCAG CCGCATGCTA CGTCACCGCG CAGGCGCTAC AGCGCCGGTA CCCATGCCCA
TTGTTCTCGG TGTCCGCGTC GGATGTCGAG CTGCCCGACG ATGCGATCGT CGCTGCACCA
CGTCCGCTGC GCGCGCATGC CGCTGCCCAT CGCCTCATCT TCGTCGGCAC ACTGGGGCAG
TTGTACAAGG CGCCGGATGT GCTGATCGAC GCAGTGGCGG CATGCGCGCG CGATGGCGTC
GATCTGACGC TAACCCTGGT CGGCGACGGG AAGCATCGAC CAGAATTGGA AGCGCGTGCG
CGTCAGCTTG GTATCGCCGA TCGGGTGGTC TTTCGCGGGT GGGTGACGGC AGGTGCAGCA
GTGCGCGCCG AACTGGATGC AGCAGACCTG TTCGTGCTGC CGTCGCGACA GGAGGGGATG
CCGCGCGCCA TGATCGAAGC GATGGCGCGT GCGCTTCCCT GTATTGGCTC GACGGTCGGC
GGCATCCCGG AACTGTTGCC GCCCGAAGAC CTTGTGCCTC CTGGCGATGC GCTGGCGCTG
GCGCGTGCGA TCCGCGCAAT GACATCCGAT CCCGAACGGA TGGCGCACGC CTCGGCGCGT
AACCTGGAAC GCGCGCGCTC ATTCACCGAA TCCAGGCTAC GCACGCAACG GCTCGCCTTC
TTCCGGCATG TGCGTGAGCA GACTGAGACC TGGCTCGCTG CTCAACGCTC ATCAACACCA
GTGCAGGCAA AGCGCCATTC GGCAACAGGA AGGTGA
|
|---|
| Protein sequence | MRVVVSLEHH FDRTPDGVVW TQTQFPYRFW QRYLEVFDQV QVVARVRDVR KAAPDWQRAD
GRSVSFAAIP DYLGPRQYLM RIRQVRTAAR GAIGAEDAVI LRVSSQIADV IYPLLRRQAR
PYGVEVVSDP YDVFAPGSVR HPLRPFFRWL FPYRLRQHCA NAAAACYVTA QALQRRYPCP
LFSVSASDVE LPDDAIVAAP RPLRAHAAAH RLIFVGTLGQ LYKAPDVLID AVAACARDGV
DLTLTLVGDG KHRPELEARA RQLGIADRVV FRGWVTAGAA VRAELDAADL FVLPSRQEGM
PRAMIEAMAR ALPCIGSTVG GIPELLPPED LVPPGDALAL ARAIRAMTSD PERMAHASAR
NLERARSFTE SRLRTQRLAF FRHVREQTET WLAAQRSSTP VQAKRHSATG R
|
|---|
| |