| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3618 |
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| Symbol | |
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| ID | 5210596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4519833 |
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| End bp | 4522340 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640597211 |
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| Product | spermine synthase |
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| Protein accession | YP_001277923 |
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| Protein GI | 148657718 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCAGG CGCAGCAGAC AGGGCTGGTA CTTGCTATCT TTTTTGTGAG TGGCGCGAGC
GGTCTGATCT ACGAAGTTGC CTGGTTCCGC CTGCTCAGCC TCAGTTTCGG CGTCAGCGTC
TACGCCGCCA GTGCAGTGTT GACCGCGTTC ATGGGCGGGC TGGCACTGGG GAGTTGGGTG
TTTGGGAAGA TCACAGCGCA CTGGCAGCAG AACGATCCCT CTAAACGACG CTCGACTGCG
GCATCACTTC TGCGTCTCTT TGCGCTGATC GAGATTGGTG TTGCGCTCTT CGCGTTCGCT
ACACCGCCTC TTTTCGCCGG ATTGACCAGC CTCTATGTCT GGATCGCACG TGAGGCGCGT
CCTGACCCAT TTGTTTACAA CGCTGTGCGT ACCGCACTGG CAACACTGGC GCTTGTGCCG
CCAACCTTTC TGATGGGCGG CACATTGCCG GTGCTGGCGC ATCTCCTGGC GGCGCAAGAA
CAGGATCGCG GTCAACGGCT CGGTCTGCTC TATGCCATCA ATACGTTCGG CGGCGTGCTG
GGCGCCCTTA CCGCCGGTCT GCTCCTGATC CCATCACTTG GCGTGAACGG GTCGCTCTAC
CTTGGCGGTG CGCTGGATCT GGCGATTGCC GGTCTATCGT TCTGGCTGGC GCGTCACTGG
CAGACGGAAC GTGATGTTCC TGCACCGGTA GCGCCTCCCG CTCCATCGCA ACCTGCGCCG
CAGTCGCGTC GGACGACGCG CACGGCGTCG GCGCGTGCAT CGGGAGGGCG AACCATCGTG
ACGACGAATA TCAGCATGCG CCTTGCACAT AATGGCGCCG TTCCTGGACT TCAGATTCAA
TCTGCTGTGA ATCGCTCCGC CTCCATCCTG AAACCGACGC AACTGGCACT GATCGGGTAT
GCGCTGTCTG GATTCGCAGC GCTCGGTTAC CAGGTGGTGT GGACGCGCAC CCTGGCAATT
TTCAGTCTGA ATGCGGTGTA TTCGTTCACC ATCATGCTGG TGACGTTCCT GATCGGTCTG
GCGGCAGGCA GCGCCTGGAT GGGGCGCAGG ATCGATCGCC ATCCGCAACC GCTCGCGCTC
TTTGGCTGGT TGCAGATCGG GATCGGGATG TGCGCCGTGA TTGCGCTCTA TGCCTTTGCG
CGTATGCCGA CCCTGCTGGA TATGTTCACT GCCCGCACCA GTTTCCTTGC CAGTTTGTGG
GCGGAATTCT TCGCTGCCGC CGTGATCATG ATTGTCCCGA CTATCCTCAT GGGTGCGGTC
TTTCCGGTTG TAGCGCGACT GTATACCGCA CCCTCTCCAA CGGACGCCTC CGTGGCGACT
GTACCGGATC AGAAAGGAGT GGGGTCACGC ATCGGACGGC TCTATGCGCT CAATACGGTT
GGCGCGACGC TTGGCGCATG TATGGCAGGC TTTGTCTTCA TTCCGCTGAT CGGGCTGCAA
CGCTCCTCTC TCCTGCTTGT GGCGCTTAAC CTGATCATTG GCGCAGTGGC AGTGCTGATG
GCTTCGCCAG CATCAGGGGA ACGGCTGCGT CTGGCGGGGG TGGCAGGGGC GACGATGCTG
GCAGTGGCAT TGCTACCCCC TGGCGTCTAC CTGGGTTTCC GCGAAGGTGT CATCCCGGAA
CTGGTGTACT ACCGTGAAGG GGTGGATGCG ACCGTTGCGG TATTCAAGGT TAAGTATCCG
CCGCTCAAAA TGTCGTTCGT CAATGGGCGC AGCGAGGTGC CAACCGACAA ACATAGTATG
CGTGCGTTCC ATCTGCTTGG GCATCTGCCA GCGCTGATCC GACCAGACGC GCACAATGCG
CTGATGATCA GTTTTGGCAA TGGAATCGCT TCTGGCGCAA TGGCAACCCA TCCGATCCCG
CGCATCCATG CGGTTGAACT GGTCGCCGAA CAGGTCGAGG CAGCACGTCT CTATGAAGTC
GAAAATCGTG GAGTGCTGGA TCGCTCTGGC TTCCAGATCA CCATCGAAGA TGGGCGCAAT
TACCTGCTCC GCAGCACAGA ACGCTACGAC ATCATCACTG CTGACGCCAC TCATCCGATC
AACAGCAGCA GTTGGGCGTT GTTCACTCAA GAGTTCTACA CGATGGTTCG AGATCATCTT
GCCGATAATG GTGTGTTTAT CCAGTGGTTG CCGTTTCACG ATCTGTCGGA GCGCGATTAC
CGCGATATTA TTCATACCTT CCAGAGCGTT TTTCCACATA CGACGCTCTG GTACACCGGC
GCCACGCATA GTTTTCTGGT CGCCACACCC TATCCGTTAA CGCGCGATCA GATCCTGGCG
CTCGATGCAC AACTACGGGG ATCGGCAGCC GGTGCGGATC TCGGCGACAG CCGGTTGCTG
GCAGCAGACC TGATTATGCA CGCGGATGAG GTTGCCGCAT TCGCTGCACA TGGACGGATC
GTGCACGACG ACCGCGCGTT CTTCATTCCG GCAATGGACC GTGATCGCAT TCTTGCGGCG
CTGGAACCGT ATGCACGGGC GGCTGCACGC GAAGCAGGGG GATCGTAG
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| Protein sequence | MKQAQQTGLV LAIFFVSGAS GLIYEVAWFR LLSLSFGVSV YAASAVLTAF MGGLALGSWV
FGKITAHWQQ NDPSKRRSTA ASLLRLFALI EIGVALFAFA TPPLFAGLTS LYVWIAREAR
PDPFVYNAVR TALATLALVP PTFLMGGTLP VLAHLLAAQE QDRGQRLGLL YAINTFGGVL
GALTAGLLLI PSLGVNGSLY LGGALDLAIA GLSFWLARHW QTERDVPAPV APPAPSQPAP
QSRRTTRTAS ARASGGRTIV TTNISMRLAH NGAVPGLQIQ SAVNRSASIL KPTQLALIGY
ALSGFAALGY QVVWTRTLAI FSLNAVYSFT IMLVTFLIGL AAGSAWMGRR IDRHPQPLAL
FGWLQIGIGM CAVIALYAFA RMPTLLDMFT ARTSFLASLW AEFFAAAVIM IVPTILMGAV
FPVVARLYTA PSPTDASVAT VPDQKGVGSR IGRLYALNTV GATLGACMAG FVFIPLIGLQ
RSSLLLVALN LIIGAVAVLM ASPASGERLR LAGVAGATML AVALLPPGVY LGFREGVIPE
LVYYREGVDA TVAVFKVKYP PLKMSFVNGR SEVPTDKHSM RAFHLLGHLP ALIRPDAHNA
LMISFGNGIA SGAMATHPIP RIHAVELVAE QVEAARLYEV ENRGVLDRSG FQITIEDGRN
YLLRSTERYD IITADATHPI NSSSWALFTQ EFYTMVRDHL ADNGVFIQWL PFHDLSERDY
RDIIHTFQSV FPHTTLWYTG ATHSFLVATP YPLTRDQILA LDAQLRGSAA GADLGDSRLL
AADLIMHADE VAAFAAHGRI VHDDRAFFIP AMDRDRILAA LEPYARAAAR EAGGS
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