| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3617 |
|---|
| Symbol | |
|---|
| ID | 5210595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4518517 |
|---|
| End bp | 4519557 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640597210 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001277922 |
|---|
| Protein GI | 148657717 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACA AAGTGCGGGT CGGCGTATTG GGGTTGACGC ACGACCACGT GTGGAAGGAA
CTGCGCGATC TGGCAACCTG CGACGCAGGT GTGCTGGTTG CCGCAGCAGA CCCCAACCCC
GCCCTGCGGG AACACATCCG ATCATTCGGA TGCGAGCAGG TCTTCGATGA CTACAGCGAT
ATGCTGGACG CAGTTGAACT CGACGCAGTA TATGTGTTCA GCGATAACCT GCGCGGCGCG
GAGTTGACCG AAATGGCTGC GGCGCGCGGT TTGCACGTCA TGGTCGAAAA GCCAATGGCG
GCGACCTATG CCGACGCGGT GCGGATGCGT GGCGCTGCAT ACACCGCAGG AGTGCAGTTG
ATGATCAACT GGCCCATCAT GTGGTGGCCC ACGGTGCAGC ACGCCCTGAA CCTGATCGCA
GCCGGGCGCA TCGGTTCGGT CTGGCAGGTC AACTATCGCG CGGCGCACGC CGGACCGCGC
GAACTCGGCT GTTCGCCCTT CTTCTGCGAA TGGCTGTACG ACCCACGGCG CAACGGCGCT
GGCGCGTTGA TGGATTACTG CTGCTACGGC GCGGCGCTGA CCTGTGCGCT TCTGGGGTTG
CCTTCCCGCG TTACAGCGCT GACGGGACGC CTGTGGAAGC CCGACCTGCT GGCGGAAGAC
AACGCTGTGA TCGTCATGCA GCATGCGCGC GCCATCAGCA CTGCTACCGC ATCGTGGACG
CAGATCGGCG ATATGACCAG TTATGAGCCG ATGATCTACG GCAGCGAAGG AACTATTCAT
ATTCGTGAAC ATGGCAGGGA ACTGTGGCTT GCCGATCGTG AACACCGCGA CGGCATTCGT
CTCGACGTTC CTGAGCCGCC AGTCGGGATG CGTAACAGCG CTGAGTATTT TCTCGGGCAT
ATTCGCTCCG GCGAACCGAT CACCGGACTG TGTAGCGCCG AGGTTGGCGT GATGGCGCAG
GAGGTGCTGG AGGCTGCTAT CATCTCAGCC GCTGAGGGAC GTGTCGTATC GTTGCCGCTA
CCGATGACAC TGATCGCCTG A
|
|---|
| Protein sequence | MADKVRVGVL GLTHDHVWKE LRDLATCDAG VLVAAADPNP ALREHIRSFG CEQVFDDYSD
MLDAVELDAV YVFSDNLRGA ELTEMAAARG LHVMVEKPMA ATYADAVRMR GAAYTAGVQL
MINWPIMWWP TVQHALNLIA AGRIGSVWQV NYRAAHAGPR ELGCSPFFCE WLYDPRRNGA
GALMDYCCYG AALTCALLGL PSRVTALTGR LWKPDLLAED NAVIVMQHAR AISTATASWT
QIGDMTSYEP MIYGSEGTIH IREHGRELWL ADREHRDGIR LDVPEPPVGM RNSAEYFLGH
IRSGEPITGL CSAEVGVMAQ EVLEAAIISA AEGRVVSLPL PMTLIA
|
|---|
| |