| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3616 |
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| Symbol | |
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| ID | 5210594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4516585 |
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| End bp | 4518444 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597209 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001277921 |
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| Protein GI | 148657716 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.748752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATC TCTCGCTTCT CCCGATGCCG CAGTCGCTGA CGTTCTTGCC GGGCGCCTAT
GTTGCCAGTT CGGCGCGCCG CATCCTGTTG CAGGGAACAG CGCCGGGAGC GCTCCTCTTC
GCAGCGCGGC GTTTGCAGAG CGCATTACGC GCCCACGCTG GCGTCGAGTG GGAACTGACC
GCCACACCCG AAGGACCGCC GGGCGAAATC GGCGCCACGC TGCGGGTGAT CGCTGATAGC
GCCAGCCATC CGCAGGGGTA CGTGCTTACG ATCAAGGACG GCGGCATCAT TATCGAAGCG
TCAGCCCCCG CTGGCATCTT CTATGGCGTC TGCACGCTGA TCCAGATCGT CGAGCAGACC
GGTCGCACCC TTCCCTGCCT GCACATCAGC GACTATCCCG ATTTTGCCGC ACGCGGAGTG
ATGATCGATA TCAGCCGCGA TAAAGTCCCA ACAATGGAAA CCCTGTTCAT GCTGGTCGAT
ATGCTGGCAG GGTGGAAGAT CAACCAGGTG CAACTCTACA CCGAGCATAC CTTCGCGTAT
CGCAATCACC CCGATGTGTG GGCGCGCGCA TCGCCGATGA CCGGCGAGGA AATCCTGACG
CTCGATGCGT ACTGCAAAGA ACGCCATATC GACCTGGTTC CCAACCAGAA CTCGTTTGGG
CATATGCACC GCTGGTTGAT CCATCCGCGC TATGCCGCGC TCGCCGAGAC CCACGACGCA
TTCCAGGCGC CCTGGGGAGT GATGCAGGGA CCGTTCAGCC TGGCGCCGGA CGATCCCGGC
AGCCTGGAAC TGGTGCGCAG CCTGTATGAT GAACTGCTGC CGCACTTTTC GAGCCGGTTG
TTCAACGTCG GCTGCGATGA GACGGTCGAT CTTGGACAGG GACGCAGTAA AGACATCTGT
GCACAGCGTG GCGTCGGTCG GGTCTACCTC GATTTTCTGC TCAAACTCTA CGATGCTGTG
AAGCAGCACG GGCGCACGAT GATGTTCTGG GGCGATATTG TCAACAATCA CCCGGAATTG
ATCGGCGAAC TGCCACGCGA TGTAATTGCG CTCGAATGGG GATATGAAGC CGATCACCCC
TTTGATCGCA ATTGCGCGCG CTATGCCGAA GCAGGGATCC CCTTCTATGT CTGCCCCGGC
ACGTCGTCGT GGCAAAGCAT CGCCGGGCGC ACCGACAATG CGCTGGGCAA TCTGCACAAT
GCAGCCGAGC ACGGGTTGAA GCACGGCGCT ATCGGCTATC TGATCACCGA TTGGGGCGAC
ATGGGGCACT GGCAGGCGCT GCCGATCAGT TTTCCGGGAT TCGCGGTCGG CGCGGCGTTT
GCCTGGGCAT ACGCTGCAAA CCGCACCATC AATGTTCCGG CAGCGGTCAG CCGCCATGCG
TTCACCGACC CGACTGGCGC GATGGGACAG GTTGCATACG ACCTGGGGAA TGTGTATCGC
GCCGTCGGCT ACGAGCCGCC CAACTCGTCG GTGCTGTTCT GGGTGTTGCA GGCGCCGGAC
ACCGATGCGC GCAACCTGCC GCCGCTCGAC TTCGACCGCG CGCTCGATGC GATCGATGCT
GCAATCCAGC CGATTGCCAC AGAACGCATG ACGCGCGCCG ATGCCCCGCT CATCCTGCAA
GAGTTCGATA ACACGGTGCG ATTACTGCGC CACGCCTGCC GTCTGGGACA GTTGCTGGTT
CAACCCGATG GACCCGGCGC GTTGCCGCGG CGCCGGTTGC TGAACAACGA CATGCGCGAG
ATCATTCGCG AGTACGAACG TCTCTGGCTG GCGCGCAACC GCCTCGGCGG GCTGTCCGAC
AGCGTCGCCC GGTTGGAGCG TGTGCGCGCC CGCTATACTT CTCAGGAGCA GCACGCATGA
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| Protein sequence | MDHLSLLPMP QSLTFLPGAY VASSARRILL QGTAPGALLF AARRLQSALR AHAGVEWELT
ATPEGPPGEI GATLRVIADS ASHPQGYVLT IKDGGIIIEA SAPAGIFYGV CTLIQIVEQT
GRTLPCLHIS DYPDFAARGV MIDISRDKVP TMETLFMLVD MLAGWKINQV QLYTEHTFAY
RNHPDVWARA SPMTGEEILT LDAYCKERHI DLVPNQNSFG HMHRWLIHPR YAALAETHDA
FQAPWGVMQG PFSLAPDDPG SLELVRSLYD ELLPHFSSRL FNVGCDETVD LGQGRSKDIC
AQRGVGRVYL DFLLKLYDAV KQHGRTMMFW GDIVNNHPEL IGELPRDVIA LEWGYEADHP
FDRNCARYAE AGIPFYVCPG TSSWQSIAGR TDNALGNLHN AAEHGLKHGA IGYLITDWGD
MGHWQALPIS FPGFAVGAAF AWAYAANRTI NVPAAVSRHA FTDPTGAMGQ VAYDLGNVYR
AVGYEPPNSS VLFWVLQAPD TDARNLPPLD FDRALDAIDA AIQPIATERM TRADAPLILQ
EFDNTVRLLR HACRLGQLLV QPDGPGALPR RRLLNNDMRE IIREYERLWL ARNRLGGLSD
SVARLERVRA RYTSQEQHA
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