| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3608 |
|---|
| Symbol | |
|---|
| ID | 5210586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4507428 |
|---|
| End bp | 4508111 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640597201 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001277913 |
|---|
| Protein GI | 148657708 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.657014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCACA TTCATCTGGT GGATAGCGAC AGCACATCAT TAGCCGTCAC TGCTGCACTT
TTTGAGCGCG CGCACTACCA CGTCAGTTCT TCAAGCGGCG GTCGCGATGC GCTGCGCGCC
GTCTTCGGCG GTATGCCTGA TATGGTGATC CTCGAGGCAG AACTGAACGA CTACGACGGG
TTCGAGGTGT TGCGCCGCAT TCGACGCAGC CTGGATACGC CGGTCGTCTT CTACAGTCAT
CGGGCGCGCG CCGAAGACCG CATCATGGGG TTGCGCCTCG GCGCCGATGA TTATATCGCC
AAGTACACCC CTTCATCCGA ATTCATCGCC CGCGTCGGCG CTGTGCTGCG CCGCTGCCAG
CAGGCTCGTC GCCCACCCAT GGAGCGATTG AGTTGCGGTG GATGGGTCCT TGATCCGGCA
GGACAGATCT GCGTGGCATC TGACCGCCCG GCGGTCGAAT TGACCCCGCG CGAGGTGCAC
CTGCTATCGT TCTTGATGAA ACGTAGCGGG CAGGTCTGCA CAACCAGCCA GATCATCCAG
CATATCTGGG GCTATACGAC CCGTCAGTCG CGCAGCATTG TTGCGACCTC GGTCTGGCGG
CTGCGCGCCA AACTCGAACG CGACGCCGAT CAACCACGAC ATATTCTGAC CGTGCGCAAC
ATCGGGTATA CGTTCGTTCC CTGA
|
|---|
| Protein sequence | MPHIHLVDSD STSLAVTAAL FERAHYHVSS SSGGRDALRA VFGGMPDMVI LEAELNDYDG
FEVLRRIRRS LDTPVVFYSH RARAEDRIMG LRLGADDYIA KYTPSSEFIA RVGAVLRRCQ
QARRPPMERL SCGGWVLDPA GQICVASDRP AVELTPREVH LLSFLMKRSG QVCTTSQIIQ
HIWGYTTRQS RSIVATSVWR LRAKLERDAD QPRHILTVRN IGYTFVP
|
|---|
| |