Gene RoseRS_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3605 
Symbol 
ID5210583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4503732 
End bp4504949 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content60% 
IMG OID640597198 
Productglycosyl transferase, group 1 
Protein accessionYP_001277910 
Protein GI148657705 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.1788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTTACA CGATACTGAT GCTGGCTTCG ACCAGTTTTT TTTCGGATTA CGGCAACCAC 
GTTCGCATCT GGGAGGAAGC GAAAGCCGTT CAACAACTCG GTCATCGCCT GGTACTGGCA
ACGTACCACA ACGGCGACGA TATGCCCGGT CTCGACATTC GTCGCTCGTG GGACGTTCCC
TGGATCCGAC GCGCCGTTGT CGGTTCGTCG CGCCATAAAC TGTACCTGGA TGTCGGTCTG
GCATGGCGCA GCCTGCGCGT CGCGCTGGAG ATCCGTCCAA CGATCATTCA TGCCCACACC
CACGAGGCAG CCTTTATCGG TCTGGCGCTG AAACGCTTGA TCGGCATTCC GCTCATCCTG
GATTATCAGG GCAGCATGAC CAGCGAAATG CTCGATCACG GGTTCATCAA GCGCACCAAC
CCGCTGTTTC CGCTGTTGAC GCGATTGGAG CGCTGGATCA ACCGCAATGC TGATGCGGTG
ATCACCTCGA CGACCAATGC AGCGAATCTG CTGCGCCGCG ATGGTTCTGT TCACCCCGAC
AGGCTCTACA CTGTCATCGA TAGCGTCAAC ACTCACCGTT TCCGCCCGTT CGACGGGTCG
CCGGAGTGGG AGGCGCAACG TTGCGAGTTA CGGCGACAAC TCGGCATTCC GGCAGACCGC
CGCATCGTGG TGTATATCGG GTTGCTGGCG CCATACCAGG GTACCCACCA TCTTATCCAG
GCAGCACGGA TTGTGACCTC ACATCGCGCA GATGTGCATT TCCTGATCAT GGGGCATCCT
GATCCTGCCA GTTATCGCGC TTATGCGGAG TCGCTCGGCG TCGGCGATCA TGTCACGCTG
CCAGGACGCA TCTTTTACCG TGACCTGCAC GCCTATCTGG CGCTTGGCGA CGTGGCGGTG
GCGCCAAAGA TGAGCCGCAC CGAAGGAAAC GGGAAGATCG GCAATTATAT GGCGATGGGG
TTGCCGGTGG TCGCCTTCGA TACGCCAGTC GCGCGCGAGT TTTTGGGGGA CTGCGGCATC
TATGCCGCCT ATGGCAGCGT CGAGGACCTG GCTGCTGGTA TCGAACTCGC GCTCGACAGA
CCGGAATGGG CGCAGGAACT GGGACGACGC CTGCGCGAAC GCGCGGTGCG TGACCTCTCG
TGGGAGCGAG CAGCACACCA GATCGAGGAG ATCTACCACA CGGTCGTCAA CCGGCAGTGC
CGGTCATCCC GCTTGTGA
 
Protein sequence
MPYTILMLAS TSFFSDYGNH VRIWEEAKAV QQLGHRLVLA TYHNGDDMPG LDIRRSWDVP 
WIRRAVVGSS RHKLYLDVGL AWRSLRVALE IRPTIIHAHT HEAAFIGLAL KRLIGIPLIL
DYQGSMTSEM LDHGFIKRTN PLFPLLTRLE RWINRNADAV ITSTTNAANL LRRDGSVHPD
RLYTVIDSVN THRFRPFDGS PEWEAQRCEL RRQLGIPADR RIVVYIGLLA PYQGTHHLIQ
AARIVTSHRA DVHFLIMGHP DPASYRAYAE SLGVGDHVTL PGRIFYRDLH AYLALGDVAV
APKMSRTEGN GKIGNYMAMG LPVVAFDTPV AREFLGDCGI YAAYGSVEDL AAGIELALDR
PEWAQELGRR LRERAVRDLS WERAAHQIEE IYHTVVNRQC RSSRL