Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3598 |
Symbol | |
ID | 5210576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4496294 |
End bp | 4496815 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640597191 |
Product | GatB/Yqey domain-containing protein |
Protein accession | YP_001277903 |
Protein GI | 148657698 |
COG category | [S] Function unknown |
COG ID | [COG1610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0386207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGC TCGAACAATT GCAAAACGAT CTCAAAACAG CCATGAAGAG CGGCGACCGG TTGCGCGTGG ATACGATCCG GATGGCAATC GATGCATTGA AGAAGGCGCA AATGGCGCAG GTGAAGGCTG CCTTTGATGC AGCCGGGGGC GAGTCGGCTG ATGCTGCTGC GCTGGCAGCT ATCGACCGCG ACCAGACTCT GACCGAGGCG GCGGAGCAGG AAACGCTGGC GAAAGAGGTC AAGCGCCGGC GCGAAGCCGC CGAACTCTAC CGCAAAGGCG GGCGTATCGA TCTGGCAGAA AAAGAGGAAG CGGAAGCGGC TATCCTTCAG TCGTACCTGC CACAGCAACT TTCGGCGGAA GAGTTGCGTC CCATGGTCCA GGCGATCATC CATGAGATTG GCGCAACCGG TCCTGCCGAT ATGAGCAAAG TGATGCCGGT GTTAATGCAA CGTCTCAAAG GTCGCGCCGA TGGTCGCCTG ATCAACCAGG TTGCGCGTGA ACTTTTGAGC CAGGCGCAGT AA
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Protein sequence | MALLEQLQND LKTAMKSGDR LRVDTIRMAI DALKKAQMAQ VKAAFDAAGG ESADAAALAA IDRDQTLTEA AEQETLAKEV KRRREAAELY RKGGRIDLAE KEEAEAAILQ SYLPQQLSAE ELRPMVQAII HEIGATGPAD MSKVMPVLMQ RLKGRADGRL INQVARELLS QAQ
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