Gene RoseRS_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3588 
Symbol 
ID5210566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4485109 
End bp4486164 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content63% 
IMG OID640597181 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_001277893 
Protein GI148657688 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAC AGCCGGAAAA CTGGGGCATC ATCGGGCACG AATGGGCAGT CGAATTCCTG 
CGACGCTCGA TAGCCGGAAA CCGCATTGCG CATGCGTATC TGATTGGCGG TCCGGAGGGA
GTGGGGAAAG CGTTGCTGGC GTTACGCCTG GCGCAGGCGC TTAACTGCGA ACAGGGGACG
CCCGATCCCT GCCTGCGTTG CCGCTCTTGC CAGCGGATCG AACGTGGCAA TCACCCGGAT
GTACGCCTGA CCGGGATGGC GATGCAGGCT GCGGGCGCCA AAGCCGACGA AGCTGCCCGC
CAGAAAGAGG TCAAGATCGA CACGGTGCGC GAATGGCAGC GCGATATGAT GCTGAAGCCC
TATGAAGGAC GGCGGCGCGT TTTTATTCTG CACGATGCCG AAAAGTTGAG CGAGGCGGCG
TCGAATGCGA TGCTGAAGAC GCTGGAAGAG CCGCCGCCGT ATGCGACGCT CATTCTGGTA
GCGCATACGG CGGGCAGCCT GCTGCCGACG GTGGTTTCAC GCTGCCAGTT GCTGCGGTTG
CGTCCGTTGC CGCGGGCGCA GGTGGCTGCC GCGCTGCGCC AACAGTGCAA TCTTGCCGCC
GAAGATGCCG AACTCCTGGC GGCGTGGAGC GGCGGACGGA TCGGATGGGC GCTCCGCATG
GTTGCAGACC CCAACCAACT GGCAGCGCGC CAGGAACAGT TCAGCGAACT CCTTGCCCTT
ACCGACCAAC CGCTGGCAGC CAGGCTGCGC TGGGCGGAAG AGCGCGCAAA AGCATACCGT
GCCGGTGAGC AGGCGGCAGT GTTCGAGATG CTCGACTTGT GGCAGAGCTG GTGGCGTGAT
GTGTTGTTGA CGGCTGCCGG TTGTCCACAG GCGGTCGTCC ATATTGACCG CCGTGATGAT
CTGGCAGCAG TGGCGACTCA GTATGCCCTT CCCGACCTGC ATGCCTTTGT TGCGAGCATC
AACCTGGCGG CGCAGCGTTT GCGCGATAAT GTCAACCCAC AACTCGCGCT TGAAGGCGTG
CTGCTGTCGA TGCCGGAACG TCGGGCAGCG CGATAG
 
Protein sequence
MNAQPENWGI IGHEWAVEFL RRSIAGNRIA HAYLIGGPEG VGKALLALRL AQALNCEQGT 
PDPCLRCRSC QRIERGNHPD VRLTGMAMQA AGAKADEAAR QKEVKIDTVR EWQRDMMLKP
YEGRRRVFIL HDAEKLSEAA SNAMLKTLEE PPPYATLILV AHTAGSLLPT VVSRCQLLRL
RPLPRAQVAA ALRQQCNLAA EDAELLAAWS GGRIGWALRM VADPNQLAAR QEQFSELLAL
TDQPLAARLR WAEERAKAYR AGEQAAVFEM LDLWQSWWRD VLLTAAGCPQ AVVHIDRRDD
LAAVATQYAL PDLHAFVASI NLAAQRLRDN VNPQLALEGV LLSMPERRAA R