Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3585 |
Symbol | |
ID | 5210563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4482260 |
End bp | 4483744 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640597179 |
Product | carbohydrate kinase, FGGY |
Protein accession | YP_001277891 |
Protein GI | 148657686 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.857357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCGA AAGACGCTGC GCTACCGTTC GTTCTCTCGC TCGATATTGG CACCTCTTCG GTGCGCGCAT TCGTGTTTGA TGCGCGGGGA AGGCGAATAA GCGGCATTGG TGCGCGCGAA CCGCTGGCAG TGCGCGTGTC GTCCGATGGC GCTGCGGAGA TCGATGCGGC GGAACTGTTC GATGCCGTGG CGCGGTGCCT CGATGGTGCG CTTGCGCAGT CGGTCGATCT TCTTCCGCCG AATGCCATCG CTGGCGTTGC CGTGACAACC CTGGCGCCCA CCCTCGTGGC GCTCGACCGT GACGGCGTTC CACTGACACC GGTCTTTACC TATGCCGAGA CGCGCTGCGC GCAGGACGCA GCCGCACTGC AAGCGCGTCT CGACGAACGC GAGATCCATC AGCGCACCGG GTGCCTCCTG CGCACCAGTT ACTGGCCTGC GCAACTTGCC TGGCTGCGAC GCACACGCCC GGCGGTCTTC CGCCAGGCTG CATTCTGGGC GACATTTGGC GACTACCTGG AGTTGCGCCT CTTCGGACGA CGGCGTATCA GTTATTCCGT CGCTTCCTGG ACCGGGCTGC TCGACCGGAT GCTCCTGTCG TGGGATCTGC GATTGCTTGG CGAACTGGGG CTTCGCCCCG GACAGCTGGC GTCACTCGTG GATCGGGATG TTCCTATCCA GGGGCTGCTC CCTGAACATA CGGCGCGCTG GGCGGAACTG GCAGACGTGC CGTGGTTTCC CGCCATTGGT GATGGCGCGG CCGCCAGTAT CGGCAGCGGA TGCAGCGGAC CAACCCGCGC TGCGCTGACG GTTGGCACCA CCGGAGCATT GCGCATCACG CTGCCAACTG TAGCGCATGT GCCCGCCGGT CTCTGGTGCT ATCGCATTGA TCGTCACCGC GCACTGCTTG GCGGCGCGAC GAGTGAGGGC GGCAATGTCG TTGCCTGGCT GCGGGATACC CTGCGGATCG ATGAAGACCC GGATGTGCTT GATCGGGCGC TGTCCGCGCT TCCGCCCGAT GGTCACGGGT TGACCATCCT GCCGTTTTGG GCGGGCGAAC GCAGCCCTGG CTGGAGTGGC GATGTTCGAG CTGCGATCAC CGGTCTGTCG TTGGGAGTAA CGGCGCTCGA AATCCTGCGC GCTGGCATGG AATCTGTCGC GTACCGGTTT GCACTGATTC TGGAGCAGAT CGAGCAGGCT GGCGTCACCC CTTCGGCTTT TATCGCCGGA GGTGGCGCAC TGCTGGCGTC GCCCGCCTGG ATGCAGATCA TTGCCGACGT ACTTGGGCGA CCGCTCATCA TCGCCGCAGA ACCCGAAGTC AGCGCCAGAG GCGCGGCAAT CCTGGCGCTC GATGCGCTCG GAGTGGCAGT GGATGAGCGC GACACTGCAA CAGGCGCTGT TGGTTTTGTC CCCAACCCCG ACAATTACAG CCGCTATCGC GCCGCAATCG CTCGCCAGCA GGCGCTGTAC CGGCGGATGA TCTAA
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Protein sequence | MTSKDAALPF VLSLDIGTSS VRAFVFDARG RRISGIGARE PLAVRVSSDG AAEIDAAELF DAVARCLDGA LAQSVDLLPP NAIAGVAVTT LAPTLVALDR DGVPLTPVFT YAETRCAQDA AALQARLDER EIHQRTGCLL RTSYWPAQLA WLRRTRPAVF RQAAFWATFG DYLELRLFGR RRISYSVASW TGLLDRMLLS WDLRLLGELG LRPGQLASLV DRDVPIQGLL PEHTARWAEL ADVPWFPAIG DGAAASIGSG CSGPTRAALT VGTTGALRIT LPTVAHVPAG LWCYRIDRHR ALLGGATSEG GNVVAWLRDT LRIDEDPDVL DRALSALPPD GHGLTILPFW AGERSPGWSG DVRAAITGLS LGVTALEILR AGMESVAYRF ALILEQIEQA GVTPSAFIAG GGALLASPAW MQIIADVLGR PLIIAAEPEV SARGAAILAL DALGVAVDER DTATGAVGFV PNPDNYSRYR AAIARQQALY RRMI
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