Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3583 |
Symbol | |
ID | 5210561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4480442 |
End bp | 4481668 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597177 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001277889 |
Protein GI | 148657684 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATGTCG GTATCGATTT TACGGCTGGC GTCTGGCAGG GGGCCGGCAT TGGGCGGTAC ACACGCGAAC TGATCGGCGC CGTTCTTGCT CAGAGTCCTG ATCTTCGCTT CACGCTGTTC TACGCCGCTG GCTTTCCAGG CGCTGATTCT CCGCCCTATC TGCCTGAGGT GCATCGCCTC TGCGCCTCAC ATCCGCATAC CCGCGCCGTC CCGATCCCGC TGCCGCCGCG TCGCCTGACG CAGATCTGGC ATCGGTTGCG CATTCCGCTG CCGATCGAAT GGCTGACCGG TCCGCTCGAT ATTCTGCACG CGCCTGATTT CGTGCCGCCG CCAACCCGCG CTCGCACCCT CGTCACCATC CACGATCTCT CGTACATGGT GCATCCCGAG TGCGCAGTTC CGGGAGTCGC CGCTTATCTG CGCGATGCCG TGCCGCGCGC CTTGAAGCAA GCCAGTATCA TTATTGCCGA TTCGGAGTCG ACCAGGCGCG ATCTGCATCG ACTGTTGAAC ATCGCCCTCG ACCGTGTGAC GGTGGTCTAT CCAGGGGTCG ATGCGCGTTT CCGCCCGTTG CCGCCGGACG TATGCGAACC GGTGCGGTGT CGGTTGAACC TGCCACGCCG TTTCATTCTG TTTGTAGGCA CCATCGAACC GCGGAAGAAC CTCGTGCGGT TGCTGGAAGC GTTTGCCCGC ATCGACCCGA CGACGGGCGG GGAGGACCTC TTCCTGGTAC TCGCCGGTCG CCGTGGATGG ATGTATCAAC CGGTGTTCGC GGCCATTGAC CGGTTGAATT TACATGATCG TGTCCAACTG CTCGATTTTG TGGCGGATTC TGACCTGCCG GTAGTGTATA ATCTTGCACA GGTATTCGTG TATCCCTCAC TGTACGAGGG GTTCGGCTTA CCACCGCTCG AAGCGCTGGC GTGCGGTACG CCGGTGGTGA CATCTGACAA TTCGAGTCTC CCGGAGGTGG TGGGCAATGC CGCTCTCCTG GCGCGCGCCG ATGATGTGGA GGCGCTTTCG GAGGGGATGA TCCGCCTGTT GAAAGACGTG GCGCTGCGGG ATCGGTTGCG TCAGGCGGGT CTGGAACAGG TGCGACGGTT TCGTTGGGAA GCGTCTGCCC GACAGATTAT CGAACACTAT CATACGTTGT CAACGGGAGC ATCGCATGAG GCAACAACCG GAGCTCTCCG GCGAAGCGCT CGACTCCGAC GAGATGGAGA GCCGTAG
|
Protein sequence | MHVGIDFTAG VWQGAGIGRY TRELIGAVLA QSPDLRFTLF YAAGFPGADS PPYLPEVHRL CASHPHTRAV PIPLPPRRLT QIWHRLRIPL PIEWLTGPLD ILHAPDFVPP PTRARTLVTI HDLSYMVHPE CAVPGVAAYL RDAVPRALKQ ASIIIADSES TRRDLHRLLN IALDRVTVVY PGVDARFRPL PPDVCEPVRC RLNLPRRFIL FVGTIEPRKN LVRLLEAFAR IDPTTGGEDL FLVLAGRRGW MYQPVFAAID RLNLHDRVQL LDFVADSDLP VVYNLAQVFV YPSLYEGFGL PPLEALACGT PVVTSDNSSL PEVVGNAALL ARADDVEALS EGMIRLLKDV ALRDRLRQAG LEQVRRFRWE ASARQIIEHY HTLSTGASHE ATTGALRRSA RLRRDGEP
|
| |