Gene RoseRS_3581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3581 
Symbol 
ID5210559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4478345 
End bp4479298 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content61% 
IMG OID640597175 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001277887 
Protein GI148657682 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATACC TCATTACAGG CGGCGCCGGC TTCATCGGCA GCCATCTGAG CGATGCGCTG 
CTGGCGCGTG GCGATCAGGT GGTGTGCATC GACAACTTTA ACGACTATTA CGATCCGGCG
CGAAAGCGGC GCAATATCGC CCGCGCGCTG ACGAACCCCG GCTATACGCT GGTCGAAGCG
GATTTCCGCG ATGCAGACGC GATGGATCGT ATCTTTGCGC ACTACCGACC GCAACGTGTG
GCGCATATTG GCGCGATGGC GGGTCCGCGC CCCTCGATGC AGAATCCTGC GCTCTACGAA
GATGTCAATG TGCGTGGGAC GCTGATCGTG CTGGAGACGG CAGCGCGCTA TCAGGTTGAT
GGTCTGGTGC TGGCATCGAC ATCCTCGGTC TACGGTCTAT CGCCGACGCC ATGGTCGGAA
GAGTCGCCGA CCGACCGCCC GTTGTCGTTC TATGCCGCCA CCAAGAAGGC GGCGGAAGTG
CTGGCATACA CAGCGCACCG GCGCCACGGC ATTCCGATCC GCATCGTGCG GTTCTTCACC
GTCTACGGTC CGCGCGGGCG CCCGGATATG ACGCCGCACC TGTTTGTCGA TGCGATGGTT
GCCGGGAAGG CGATCACCCT CTTCAACGGC GGCATCGGGG TCTATCGCGA TTGGACCTAC
ATTGCCGACA TTGTGGCAGG GGTCATTGCA GCGCTCGATA TGGACGCTGC ATTCGAGATA
TTCAATCTGG GGCATTCGAG TCCGGTGCAG TTGATCGATT TCGTGCGCAC CCTGGAAGAG
GTCACCGGAT TGCGCGCCGG GATTGTTGCA CAACCACTGC CGGCGGCAGA TCCGCCGGTG
ACGTTTGCAC GGATCGACAA AGCGACGCAG ATGCTCGGTT TTCAGCCACG CACGTCGCTT
GAGGAAGGGC TGGCGCGGTT TTGGGAGTGG TACCGGGGTG AATATGGCGT ATGA
 
Protein sequence
MRYLITGGAG FIGSHLSDAL LARGDQVVCI DNFNDYYDPA RKRRNIARAL TNPGYTLVEA 
DFRDADAMDR IFAHYRPQRV AHIGAMAGPR PSMQNPALYE DVNVRGTLIV LETAARYQVD
GLVLASTSSV YGLSPTPWSE ESPTDRPLSF YAATKKAAEV LAYTAHRRHG IPIRIVRFFT
VYGPRGRPDM TPHLFVDAMV AGKAITLFNG GIGVYRDWTY IADIVAGVIA ALDMDAAFEI
FNLGHSSPVQ LIDFVRTLEE VTGLRAGIVA QPLPAADPPV TFARIDKATQ MLGFQPRTSL
EEGLARFWEW YRGEYGV