Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3558 |
Symbol | |
ID | 5210536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4454811 |
End bp | 4455164 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640597153 |
Product | hypothetical protein |
Protein accession | YP_001277865 |
Protein GI | 148657660 |
COG category | [S] Function unknown |
COG ID | [COG2361] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.107769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGGA ACGTCCTCGT CTATATCAAA GACATCCTCC AGAACATGCG GGATGCTGAG CAGTTCATTC AGGGAATGAC CTACGAGCAG TTTGTGGCTG ACAAGAAGAC CGTGAATGCC ATCTTGCGAT CCATCGAAGT CATTGGTGAG GCGGCTAAAC GCGTCCCTGA TGATGTTCGC GCTCAATATC CCCAAATCCC CTGGAAAGAA ATGGCAGGGA TGCGGGATAA GGTAATCCAC CTCTATTTCA GCGTAGATAA CGAAACGGTC TGGCTCGTGG TCAAGGAGCG CATCCCCTCC TTGCAGCCAC TGATCGAACA GATCGTGCGC GATCTGGAGG ATCAGGGAAC ATGA
|
Protein sequence | MSRNVLVYIK DILQNMRDAE QFIQGMTYEQ FVADKKTVNA ILRSIEVIGE AAKRVPDDVR AQYPQIPWKE MAGMRDKVIH LYFSVDNETV WLVVKERIPS LQPLIEQIVR DLEDQGT
|
| |