Gene RoseRS_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3554 
Symbol 
ID5210532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4450735 
End bp4451346 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID640597149 
Producthypothetical protein 
Protein accessionYP_001277861 
Protein GI148657656 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC TCGTGATCAA AACCGACTCG CCGGTCGTCG CCGGTCCGCT CCAGGGACAC 
TGGACGCTGG CGGATTGGGA GGCGCTCCCG GATGACGGCA ACCGCTATGA GATCATCGAT
GGAGTGCTCT ATATGACGAC TGCGCCACAC AGTTTTCACC AGTGGATTAT CCGGCGTCTG
GAGCGCTTTA TCGGCATCGC GACGGAAGAT GCGGGGCCGG CTTACTGCTT TCCTGCACCG
GTTGGAGTCA TTATGCCCGG CTGCGATCCG GTTCAACCCG ACTATGTTGT CGTGCTGCAA
TCGCGCGCCG ACCTGTTCCG CAATGGGCGA ATCTACGGCG TTCCCGACCT GATCATCGAG
GTGCTGTCGC CGGGGACGCG CGCGTATGAT GAGCGGGTGA AACTGGTAGC ATATGCAGCG
GCTGGCGTGC CGGAGTATGC AATGGTAGAC CCGGAAACGC GCCAGGTGCG CCGCCACCTG
CTCGAAGCCC CCGGACGCTA CGCAGCGCCG GTCATCGCCG ATGCAACAGA CCAGGTTGCC
TTCGCCTGCC TGCCCGACAT CACCTTCCGC GTCGCCGACC TCTTCGCCGG AGCGCCGGAT
ACGACGCTGT AG
 
Protein sequence
MTALVIKTDS PVVAGPLQGH WTLADWEALP DDGNRYEIID GVLYMTTAPH SFHQWIIRRL 
ERFIGIATED AGPAYCFPAP VGVIMPGCDP VQPDYVVVLQ SRADLFRNGR IYGVPDLIIE
VLSPGTRAYD ERVKLVAYAA AGVPEYAMVD PETRQVRRHL LEAPGRYAAP VIADATDQVA
FACLPDITFR VADLFAGAPD TTL