Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3553 |
Symbol | |
ID | 5210531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4450022 |
End bp | 4450678 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597148 |
Product | hypothetical protein |
Protein accession | YP_001277860 |
Protein GI | 148657655 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCGG ACCGCGAACT GGAAATCGCT GCTGAGGAGG GAATAATGAC CACACTCGTG ATCAAAACCG ACTCGCCGGT CGTCGCCGGT CCGCTCCAGG GACACTGGAC GCTGGCGGAT TGGGAGGCGC TCCCAAATGA CGGCAACCGC TATGAGATCA TCGATGGAGT GCTCTATATG ACGACTGCGC CACATAGTTT TCACCAGTGG ATCATTCTCT CGCTGATCCA GTTCGTCGGG TTGCCAGCGA AGGAACGGGG GCTTGGCTAT ATGTTTATGG CGCCGATCGG CGTCATTATG CCTGGATGTG ATCCAGTTCA ACCGGACGTA ATCTTCATTC GTGCTGCAAA CGCAGAGATC ATCCGGAACG GGCGAATCTA CGGCGTTCCC GACCTGATCA TCGAGGTGTT ATCGCCGGGG ACGCGCGCGT ATGATGAGCG GGTCAAACTG GCGGCATATG CGGCGGCTGG CGTGCCGGAG TATGCAATGG TAGACCCGGA AACGCGCCAG GTGCGCCGCC ACCTGCTCGA AGCCCCCGGA CGCTACGCAG CGCCGATCGT CGCCGACGCA ACAGACCAGG TTGCCTTCGC CTGCCTGCCG GACATTACCT TCCGCGTCGC CGACCTCTTC GCCGGTGCAC CGGATACGAC AATGTAG
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Protein sequence | MTSDRELEIA AEEGIMTTLV IKTDSPVVAG PLQGHWTLAD WEALPNDGNR YEIIDGVLYM TTAPHSFHQW IILSLIQFVG LPAKERGLGY MFMAPIGVIM PGCDPVQPDV IFIRAANAEI IRNGRIYGVP DLIIEVLSPG TRAYDERVKL AAYAAAGVPE YAMVDPETRQ VRRHLLEAPG RYAAPIVADA TDQVAFACLP DITFRVADLF AGAPDTTM
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