Gene RoseRS_3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3547 
Symbol 
ID5210525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4444963 
End bp4445403 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content60% 
IMG OID640597143 
Productmembrane protein of unknown function 
Protein accessionYP_001277855 
Protein GI148657650 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CGCCGCCACA ACCACCTTCT CACTGGCAGA TGGCGCGCAG CCTGGTGCTG 
CGCTGGCTGG TGACCTCGCT GGCGATCTTC GCCGCCATCC AGATTGTGCC CGGCATCGAA
TTTGTCGGTC CTGGCTGGGA GATCGGGGTG GTCGCGCTGG TGTTTGGTCT GGTGAATATC
GCCCTGCGCC CGATTCTGAC GCTGCTGACG TGTCCGCTGG TGATCCTGAC GCTGGGATTG
TTCACGCTGG TCATCAATGC GCTCTTGCTC TTATTGACCG CCTCGATTGC CAGCAGTCTG
GGGGTGCAGT TTCGCGTCGA TAGTTTCTGG TCGGCGTTGC TTGGCGGTCT GGTGATTGCG
ATTGTCAGCA CCCTGCTCCT CTGGCTTGCC GGTGAAATGC CGGTACGTGT CATCATCCAT
ACCAATCGAC CGGATCGGTA G
 
Protein sequence
MTESPPQPPS HWQMARSLVL RWLVTSLAIF AAIQIVPGIE FVGPGWEIGV VALVFGLVNI 
ALRPILTLLT CPLVILTLGL FTLVINALLL LLTASIASSL GVQFRVDSFW SALLGGLVIA
IVSTLLLWLA GEMPVRVIIH TNRPDR