| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3536 |
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| Symbol | |
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| ID | 5210514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4430118 |
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| End bp | 4432079 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640597132 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001277844 |
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| Protein GI | 148657639 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00377] anti-anti-sigma factor |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0821285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG ACACAACCTC CGATCTGACG GCGCTGCTGG CGGAGCATGA GCGTCTGCGC
GAACAGGTGG CGCAACTGGA TCGCAATCTG GCGCGCTTCC GCGCTATCGT TGAGGATACC
GATCTGCTCA TCACCGAAGT GGACGCAAAT GGTCTCTTCA CGTATGTGAA TCCTGTGGCG
CAACGGGTCT TCGGATACGC GCCGGAGGAG TGCATTGGCA GGTCATCACT CGAATTCGTG
CACCCAGACG ATCTCGAATA CACGCAGAAG GCATTCATCG ATTGGGTGCA ACGACACGAA
CGTGCAGTGA CCATCGAGAA CCGTGTGGTG CATCGCAACG GCCAGGTTTT TCATATGCTC
TGGTCGATCA CCCTGCATTA CGATGAGCAG GGACAGGTTC AGCGCGCAAC ATCGATCGCA
TACGATATTG GCACACTTCA TCAGTTGCGC AGTGAACTAC GCGAGAGTCG CACCATGTTG
CAACTGGTGA TCGACAACCT GCCGCAGGCT GTGTTCTGGA AGGATCACGA GTTGCGTTTC
CTGGGGTGTA ACCACCGTTT TCTCGTCGAT GCCGGACTGT CCTCGGTTGA CGAAGTAATC
GGCAAGACCG ACTTTGAGAT GCCGTGGAAA GCACAGGCAG CCGGGTATCA GGAAGATGAT
CGCGCCGTGA TCACCCACGG ACCCAGATTC AATATCGAAG AACAATTGAC GCGTAGTGAT
GGTTCGACAA TCTGGCTGCG CACCAACAAA GTACCGCTGC GCCGCGATGG CGAGGTTATC
GGCGTTCTGG GCATGTACGA GGATATTACC GCACTGAAGC GGCAGGAAGA AGAACTGCGC
ACCTTCAAGT TGCTGGTGGA AAATGCCCCT GACGGGATCG GCATCGCAAA TACCGATCTG
GTGTTGACGT ATGCCAACCC TGCTTTTGCT ACCATGCTTG GATACTCTAG TCTGATCGGG
ATGAAGGTGC CGGAAATCAC GCATCCTGAT GATCTGGATC TATTGAGCAC CATTGCCCAA
CAGGTGATCC AGGGTGGCGC GCCACGCGAG ATGATCCGCT ATCTGCGCAG CGATGGTTCG
ATCGTCACCG TGCAGGCGTC GGCGCTGGCA TTGCACGATG GGCATGGCAA CCTGATCGGC
TTCGCGTCGA TCAACCGTGA CATCACCGAA CAGTTACAGG CAGAGGAGAG CCTGCGCGCC
AGCGAGCAGC GCAACCGCGC GTTGCTCAAC GCCATTCCCG ATCTGATGTT CCTGCTCACT
CCCGATGGCG TCTTCCTGGA CTACAAAGCA GACAGCAGCG GCGATCTCAT TCTCCCGCCT
GAAGCATTCC TTAACCGGAA TGTTTCTGAA GTCCTGCCGC CGCATCTGGC GGAACAGGTC
ATCACGAATA TGGAGGCGCT CAAACGCACC CACGAGATGC AGACCTATGA ATATCAGGTT
TTGATCAACG ATCAGATCCG TGATTTTGAA GCGCGCATGG TGCTGAGCAA CAACGATGTT
CTCGTGTTGT CGCGCGATAT GACAAAGCAG CGGCGCGCTG AGCGCGAGCG TCAGGCGATG
CAGGAGCAGA TCATTCAGGC GCAGCAGGCG GCATTGCGCG AATTGAGCAC GCCGCTCATG
CCGATCGCCG ACGGGGTGGT TGCCATGCCG ATCATCGGCA CGATCGATAC CATGCGCGCG
CAGCAGATTA TGGAGGCGCT TCTCCAGGGG ATTGCTGAGC ACGGCGCCGA TATTGCCATC
CTCGACATTA CCGGTGTGAA GGTGGTGGAT ACTCAGGTTG CCGGCGCGTT GATCCGTGCG
GCGCAGGCGG CGCGCATGCT TGGTGCACAG GTCGTGCTGA CGGGTATCAG CCCGGAGATC
GCGCAGACCC TCGTCCACAT CGGTGCTGAA ATGCGCGAAA TGGTGGCAAA ACCAACCCTT
CAGCAAGGGA TTGCCTATGC CCTGAGTCGG CGCGTGTCGT GA
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| Protein sequence | MSTDTTSDLT ALLAEHERLR EQVAQLDRNL ARFRAIVEDT DLLITEVDAN GLFTYVNPVA
QRVFGYAPEE CIGRSSLEFV HPDDLEYTQK AFIDWVQRHE RAVTIENRVV HRNGQVFHML
WSITLHYDEQ GQVQRATSIA YDIGTLHQLR SELRESRTML QLVIDNLPQA VFWKDHELRF
LGCNHRFLVD AGLSSVDEVI GKTDFEMPWK AQAAGYQEDD RAVITHGPRF NIEEQLTRSD
GSTIWLRTNK VPLRRDGEVI GVLGMYEDIT ALKRQEEELR TFKLLVENAP DGIGIANTDL
VLTYANPAFA TMLGYSSLIG MKVPEITHPD DLDLLSTIAQ QVIQGGAPRE MIRYLRSDGS
IVTVQASALA LHDGHGNLIG FASINRDITE QLQAEESLRA SEQRNRALLN AIPDLMFLLT
PDGVFLDYKA DSSGDLILPP EAFLNRNVSE VLPPHLAEQV ITNMEALKRT HEMQTYEYQV
LINDQIRDFE ARMVLSNNDV LVLSRDMTKQ RRAERERQAM QEQIIQAQQA ALRELSTPLM
PIADGVVAMP IIGTIDTMRA QQIMEALLQG IAEHGADIAI LDITGVKVVD TQVAGALIRA
AQAARMLGAQ VVLTGISPEI AQTLVHIGAE MREMVAKPTL QQGIAYALSR RVS
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