| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3480 |
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| Symbol | |
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| ID | 5210457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4362883 |
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| End bp | 4365630 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597075 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001277788 |
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| Protein GI | 148657583 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.409586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CCGGAGTCGC TCTCACCAGT GAGCGAGAAA AGCGCATCGA CGCGCTCCTG
CAACAGATGA CGCTGGCGGA GAAAGTCGCG CTGCTGGCGG GATCGAGTAT GTGGACCACC
ACCCCCATCG AGCGCCTGGG CATTCCCGCC ATCAAAGTCA CAGATGGACC GAACGGCGCG
CGCGGTGCGG GCGGGTTTGT TGGCGGCGCC GTCACTGCGG CGTGCTTCCC GGTCGGCATT
GCGCTGGCGG CGACATGGAA CACCACACTG CTGGAAGCGG TGGGTGAAGC GCTGGCGGAA
GAGGCGCAAT CCAAAGGTGC GCATCTCCTG CTGGCGCCAA CCGTCAACAT TCATCGCTCG
CCGCTCAACG GACGCAACTT CGAGTGCTAT TCCGAAGACC CCTATCTCTC CGCACGCATG
GCGGTCGCCT ATATTACCGG GCTGCAACGG CGGGGCGTCG GCGCAACGGT CAAGCACTAT
GTCTGCAACG ACTCAGAGTT CGAGCGCAAC ACCATCAGTT CCGAGGTCGA TGAGCGCACC
CTGCGCGAAA TCTACCTGCC GCCCTTTCGC GCGGCGGTGC AGGAAGCCGG CACATGGGCG
GTTATGGCAG CGTACAATCG CGTCAACGGC ATCTATGCCA GTGAGCATCC GATGCTCCTG
ATCGATATCC TCAAGCGAGA GTGGGAGTTC GATGGCATCG TTATGTCCGA CTGGTTCGGT
ACGAAGAGCG TCGTTGAAGC CGCCGCCAAT GGTCTGGACC TCGAAATGCC GGGACCGACG
CGCTGGCGTG GTGAACGATT GCTCGCCGCC GTGGAACAGG GACAGGTAAG CCTGGCAGCC
ATCGATGAGT CCGCGCGACG GATGTTGCGC ACCATTGCCC GCGCAGGCGC CTTTGAGAAC
CCGGATATTC GCCCCGAACA GGCAATCGAC CGCCCTGCGC ATCGCGCGCT CATCCGTCGC
GCCGCCGCCG AGGGGATGGT GCTGCTCAAG AACGAGGGCG GCATCCTGCC GCTCAACCTT
GCCAGCCTCT CGTCCATCGC CATTATCGGA CCCAACGCAA AAACGGCGCA GATCATGGGC
GGCGGCAGCG CCCAGGTCAA TGCACACTAT GCGATCTCGC CATACGACGG CATTGCGGCG
CGGGTTGGCA ATCGGGCGAC TCTGGGATAC GAGATCGGGT GCACCAACCA CCGACAACTT
CCCCGCCTGG ATGGAAAACT GGTCGAGGCG GGCGACGGCA GCGGACGCGG GTTCACGATT
GTCTACTACA ACTCGCCAGA CCTGACCGGC GATCCGGTTC ATCGGGCGAC GGTCGAGACC
GGCGAGCAAG TCTGGCTCGG CGAGGTCGCT CCTGGCGTCG ATCCACGCCA GTTCTCGGCG
CGCCTTACCG CGCGCTTCAC ACCGACTGAA AGCGGCGTCC ACACGTTCAG TCTGATCAGC
GCCGGCGTGA GCCGCCTGTT TGTAAATGAC ACCCTGCTGG TGGACAACTG GACGAACCCG
GTGCGCGGCG ACACCTATTT TGGCGCTGGC AGCACCGAAG TCACCGCATC GATCGCACTC
GAAGCCGGTC GCACCTGCGA TCTGCGTCTG GAATACAGCA CCCAGGGCGC AGCCATGCTT
GCCGCAGTGC GTCTGGGATA CCTGCCGCCG GTCGCGGAAG ATGCAATTGA ACGCGCGGCG
GCGCTGGCGG CGCGTTCCGA TGTTGCGCTC GTCTTCGTCG GGTTGAACGC TGATTGGGAG
AGCGAAGGGC ATGATCGCCC CCATATGGAT CTGGTCGGCA GGCAGGCTGA ACTGATCGAG
CGCGTGGCGA ACGCCAACCC ACGCACCGTG GTGGTATTGC AAACCGGCTC ACCGGTGACG
ATGCCCTGGC TGGACAAGGT GGCCGGGGTT ATCCAGGCAT GGTACCCCGG TCAGGAATGC
GGCAACGCCA TCGCTGATGT CCTGTTTGGC GATGTCAACC CGTCGGGTCG GCTCCCGCAA
ACCTTCCCGG TGCGGTTGGA AGACAACCCG GCATACATCA ACTATCCGGG TGAGAATGGG
CGGGTGCGCT ACGGCGAAGG TATTTTCGTC GGCTACCGCT ACTACGAGAA GAAAAAAGTC
GCGCCGCTCT TCCCATTCGG CTTCGGTCTG TCGTATACCA CCTTCCGCTA TGACAATCTT
CGCCTGAGCG CCGACACCCT TGCGCCTGAC GAGCGTCTCA CCGTTCAGGT GGACGTCACC
AACACCGGAA ACGTTGCCGG GCAGGAGGTC GTCCAGCTCT ACGTTCGTGA CAGCGCGGCG
CGTGTCGCGC GACCGGAGAA GGAACTGAAA GGATTTGCCA AAGTCGCGCT GCAACCGGGC
GAAACGCAAA CCGTGACGCT GCACCTCGAC CGCGAAGCGC TGGCATACTG GGACGACGCG
CAGCATGCCT GGGTGGCGGA AGCAGGCGAG TTCGAGGTGC TGATCGGCAG TTCCTCGCAG
GACATCCGGG CACGCGCAAC ATTCCGCCTG AGCGAAACGG TGTCCTTCGG CGGACCGGCA
AAACCTCCGG TGAAACTGAG CATCGATTCG CCCGTCAAAG CATTGCTCGA ACATGAAGGA
GCGCGTCATA TACTGGAACG CTATCTGCCG GGATTTGCCG AACAGGCGGG CGTTGGAGTT
ATGATGGGGT TGACGCTGGC GCAGATGGCA GGGTTTGCAC CGGACAGAAT CACGCCGGAA
CACCTGGCAG CGATCGCCGC CGATCTGGCG CAACTGCGTG ACCAGTAA
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| Protein sequence | MTDTGVALTS EREKRIDALL QQMTLAEKVA LLAGSSMWTT TPIERLGIPA IKVTDGPNGA
RGAGGFVGGA VTAACFPVGI ALAATWNTTL LEAVGEALAE EAQSKGAHLL LAPTVNIHRS
PLNGRNFECY SEDPYLSARM AVAYITGLQR RGVGATVKHY VCNDSEFERN TISSEVDERT
LREIYLPPFR AAVQEAGTWA VMAAYNRVNG IYASEHPMLL IDILKREWEF DGIVMSDWFG
TKSVVEAAAN GLDLEMPGPT RWRGERLLAA VEQGQVSLAA IDESARRMLR TIARAGAFEN
PDIRPEQAID RPAHRALIRR AAAEGMVLLK NEGGILPLNL ASLSSIAIIG PNAKTAQIMG
GGSAQVNAHY AISPYDGIAA RVGNRATLGY EIGCTNHRQL PRLDGKLVEA GDGSGRGFTI
VYYNSPDLTG DPVHRATVET GEQVWLGEVA PGVDPRQFSA RLTARFTPTE SGVHTFSLIS
AGVSRLFVND TLLVDNWTNP VRGDTYFGAG STEVTASIAL EAGRTCDLRL EYSTQGAAML
AAVRLGYLPP VAEDAIERAA ALAARSDVAL VFVGLNADWE SEGHDRPHMD LVGRQAELIE
RVANANPRTV VVLQTGSPVT MPWLDKVAGV IQAWYPGQEC GNAIADVLFG DVNPSGRLPQ
TFPVRLEDNP AYINYPGENG RVRYGEGIFV GYRYYEKKKV APLFPFGFGL SYTTFRYDNL
RLSADTLAPD ERLTVQVDVT NTGNVAGQEV VQLYVRDSAA RVARPEKELK GFAKVALQPG
ETQTVTLHLD REALAYWDDA QHAWVAEAGE FEVLIGSSSQ DIRARATFRL SETVSFGGPA
KPPVKLSIDS PVKALLEHEG ARHILERYLP GFAEQAGVGV MMGLTLAQMA GFAPDRITPE
HLAAIAADLA QLRDQ
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