Gene RoseRS_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3478 
Symbol 
ID5210455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4360545 
End bp4361432 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content61% 
IMG OID640597073 
Productalpha/beta hydrolase fold 
Protein accessionYP_001277786 
Protein GI148657581 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.497712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCT TCCTTGTCAG AACAATGGGG TTGGCGTGTT TTCAACAAAG GAGACCGGAT 
ATGACGTCGT GGCAGGCAGG CGATGTTCGT GTTCATGGGT TGCGGATCCA CTACACACGC
ACCGGCGGCG CCAGGTATCC GCTGGTACTG GCGCACGGTT TTTCCGACGA CGGGCTGTGC
TGGACGCCGG TTGCCCGCGC ACTGGAAGCA ATGTTCGACG TGATCATGGT CGATGCGCGT
GGGCATGGTC GTTCCGATGC GCCAGAGCAC GGGTATGGTC CACTCGAGCA TGCGAGTGAT
CTCGCGGGAG TGATTACCGC GCTCGGTCTG GATCGACCTT TCATCCTGGG GCATTCGATG
GGAGCGATAA CGGCGCTGAC GCTGGCAGGA ATCCATCCCG ATCTGGCGGG CGCCATTCTG
CTGGAAGACC CGCCCCCGTG GTGGGAAGCC AGCGCCCTGA GCGCCGCTGC AGCGGACGAC
GATCGCTGGG CAGGGATGCG CACCTGGGTG TTCGGACTGA AACGTCAGAC GCGCGACGAG
TTGATCGCAG CCCAGCGCGC TGCAAACCCG GCATGGTCAG ACGACGAACT CGGACCATGG
GCAGATGCCA AACATCGCCT GAGCCTCAAT GTGATCAATC GTAGCGCACC GACCGAGGTC
GACTGGCAGA CCATTCTGCG ACGCATAACC TGCCCGACGT TGCTGATCAC CGGCGATCCG
GTGCGTGGCG CTCTGGTGAC GTCGGAAAAC GTTCAGACAT TACGGCAGTT CATCCCGCAT
CTCCAGGTTG CCCACATCCC CGACACCGGG CACAGCATCC GACGTGATCA GTTCAACCGC
TACCTGGCGG CGGTGCGTGA TTTTCTCACG GCGCATGCAC TGGAGTAA
 
Protein sequence
MISFLVRTMG LACFQQRRPD MTSWQAGDVR VHGLRIHYTR TGGARYPLVL AHGFSDDGLC 
WTPVARALEA MFDVIMVDAR GHGRSDAPEH GYGPLEHASD LAGVITALGL DRPFILGHSM
GAITALTLAG IHPDLAGAIL LEDPPPWWEA SALSAAAADD DRWAGMRTWV FGLKRQTRDE
LIAAQRAANP AWSDDELGPW ADAKHRLSLN VINRSAPTEV DWQTILRRIT CPTLLITGDP
VRGALVTSEN VQTLRQFIPH LQVAHIPDTG HSIRRDQFNR YLAAVRDFLT AHALE