Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3477 |
Symbol | |
ID | 5210454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4359597 |
End bp | 4360349 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597072 |
Product | glutamine amidotransferase |
Protein accession | YP_001277785 |
Protein GI | 148657580 |
COG category | [R] General function prediction only |
COG ID | [COG3442] Predicted glutamine amidotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.856737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.267363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGGC GGCTCCGTAT TGCCCATCTC TACCCCGACC ATATGAACAT CTATGGCGAC CGCGGCAACA TCATCGCATT GCAGCAACGG TGCCTCTGGC GCGGCATCGC CTGCGACGTG CTGCCGGTTG GTCCCGGCAC AACCGTCGAT TGGTCTGCGA TCGACATCGC TTTCTTCGGC GGCGGGCAGG ACAGCGGTCA GGCGCTGATT GCGGAAGATT TCCTGGAGCG TCAGGGACCG GCGCTGCGCG CTGCGATTGA CGACGGGTTG GTGATGCTGG CGATCTGCGG CGGGTATCAG TTGCTGGGGC AGTACTTCCT GACGCATACC GGGCAGCGGT TACCCGGCAT TGGCGCGCTT GATGTGCATA CCGTCGGCGG AAAAGAGCGT CTGATCGGCA ATGTCGTCAT CGAGACGGAA CCGACGCTGT GTGGTGCACC ACTGCGACTC GTCGGGTTCG AGAATCATTC CGGGCGCACC TATCTGGGTG CGGGTGTTCG TCCGCTGGGT CGAGTGCTTG TCGGGCATGG CAACAATGGT GAAGACCGCA CCGAGGGAGC GGTGTACCGC AACACGATTG GATGCTATCT GCACGGCTCG CTGCTGCCGA AGAACCCGCA ACTCGCCGAT CACCTGATTG CCGTGGCGTT GCAACGGCGC TATGCCGATG TCTCCGCCCT TGTTCCCCTC GACGACACGC TGGAACTGGC AGCGCAGCGG GTCATGGCGG AGCGGATGCT GCTTCGCAAT TAG
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Protein sequence | MTRRLRIAHL YPDHMNIYGD RGNIIALQQR CLWRGIACDV LPVGPGTTVD WSAIDIAFFG GGQDSGQALI AEDFLERQGP ALRAAIDDGL VMLAICGGYQ LLGQYFLTHT GQRLPGIGAL DVHTVGGKER LIGNVVIETE PTLCGAPLRL VGFENHSGRT YLGAGVRPLG RVLVGHGNNG EDRTEGAVYR NTIGCYLHGS LLPKNPQLAD HLIAVALQRR YADVSALVPL DDTLELAAQR VMAERMLLRN
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