| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3476 |
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| Symbol | |
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| ID | 5210453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4358458 |
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| End bp | 4359600 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597071 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001277784 |
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| Protein GI | 148657579 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.837777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.282412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAC GACCCGCGCG CTGGCTGGAA CGTCTGCCGT ACGATTCGCC GCTTGCGTAC
CGGCAGGCGC TCGTCTTGCA GTATCTTGCG CTGTTCATTG CCGGTGGCGC GGTGGTCGGT
ATCGGTCTCG CGCCCTTCGC CAATCAAACC CTGGAAGGTT TGATCTCCGC TCTTGCGATC
TACACCGTCG CACTGCTCGG CGTGCTGAGT GCGATCTGGC TCTTGCGCCG GGGATCTCTG
CGCGCAGCCG GCATCACCAT CGTGCTGGTC ATTCTGGCTG TGACCGGCGC TGCTATGGCG
CTTTACGGGA GGAGCCATAT TCAGTTTACC CTGCCTACTC TGGCGATTCC GGTTGTGCTG
GCGGGGATGC TTCTGGGGCG GCGGACGTTG TGGCTCACCG CCGCACTGGC TGTTGCCATC
GTTGCAGTCA CCTCGCTTGG CATGGTCTAC GCTCCGCAAT GGTTCGGAAC ATTGCGCGTA
CCTGAAGCGC ATCCGCTGGT GTTCACTGCT GGCTTCGCCC TCGTCATTGT CATTTTAACT
CTGATCCTCG ACCGTTTTAG CGGTCTGTTG CGCCAGGCGC TCGAACAGGC GCACGCGCGC
GAAGCGGAAC TCGAAGCGTT GCGTGCATCG CTGGAGCGCA CCGTGGCGGA GCGCACTGCT
GTCCTCCAGC AGAAAGTCGA TGAACTGCGC ACAGCGCACG ATACGGTGCG TATGCTCAGT
GTTCCAGCTC TGCCGGTGTT GCCCGGCGTG CTGGTATTGC CGCTGATCGG CGCCTTCGAT
AGCCGCCGGA TCGCCGATCT GCGCCATACC GCCCTGAACG CCGTTGAGCA ACGCCGCGCA
AAGTCGGTCA TTTTCGATGT CACGGGCATT CCATCTATGG ATACCCACAC GGCGCAGGCG
CTGTTGCAGA CGGCGGCAGC GGTGCGTCTG CTTGGCGCCC AGCCGTGGCT GGTCGGGTTG
CGGGCGGAAG TGGCGCAAAC CATTGTGGAA CTTGGGATTG ATCTGCGTGC ATTTCGCATA
TCTGCCAGCC TTGAGAGTGC GATCAGTACG CTTGCCGGGC ACACCGATGC AAGGCAACCA
ACACCGCGCC CCCACGCGCC AGAGCCGCCC CTGGACGGGA ATGGCGCCCG GCAGAGCAAC
TAA
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| Protein sequence | MDARPARWLE RLPYDSPLAY RQALVLQYLA LFIAGGAVVG IGLAPFANQT LEGLISALAI
YTVALLGVLS AIWLLRRGSL RAAGITIVLV ILAVTGAAMA LYGRSHIQFT LPTLAIPVVL
AGMLLGRRTL WLTAALAVAI VAVTSLGMVY APQWFGTLRV PEAHPLVFTA GFALVIVILT
LILDRFSGLL RQALEQAHAR EAELEALRAS LERTVAERTA VLQQKVDELR TAHDTVRMLS
VPALPVLPGV LVLPLIGAFD SRRIADLRHT ALNAVEQRRA KSVIFDVTGI PSMDTHTAQA
LLQTAAAVRL LGAQPWLVGL RAEVAQTIVE LGIDLRAFRI SASLESAIST LAGHTDARQP
TPRPHAPEPP LDGNGARQSN
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