Gene RoseRS_3465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3465 
Symbol 
ID5210442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4344887 
End bp4345378 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content60% 
IMG OID640597060 
ProductNUDIX hydrolase 
Protein accessionYP_001277773 
Protein GI148657568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.592671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00273603 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGCAT ATACGCCTAT TCTGGCAACG CTTGGCTATG TCATGTCGCC CGATGGTGCA 
TCGGTGCTGA TGGTGCACCG CAACGCCCGC CCGGATGATG TCCACTACGG CAAGTACAAC
GGTCTGGGCG GGAAACTGCA CTCCCACGAG GATGTCGTGA GTGGCATGAA ACGCGAGATC
CGCGAGGAGG CCGGTATCGA GGCGGACGAC CTGGTGCTGC GCGGCGTTCT CAACTGGCCC
GGCTTCGGCA AAAACGAAGA GGATTGGTTT GCCTTCGTCT TCCGCATTGA CCGCTGGAGC
GGAACGCCGT TCACCAGCAA TCCCGAAGGC GACCTGGAGT GGGTGCCGGT TGCACGCCTG
CACGAACTCA ACCTGTGGGA CAATGACCGC CTGTGGATCG ATATGGTCTT CGCGCGTGAT
CATCGGACAT TCTTCGGCGT CGCACCCTAC AAGAACGGCA AAATGGTGTC GTGGAGCTAC
GTGCTGCTCT GA
 
Protein sequence
MPAYTPILAT LGYVMSPDGA SVLMVHRNAR PDDVHYGKYN GLGGKLHSHE DVVSGMKREI 
REEAGIEADD LVLRGVLNWP GFGKNEEDWF AFVFRIDRWS GTPFTSNPEG DLEWVPVARL
HELNLWDNDR LWIDMVFARD HRTFFGVAPY KNGKMVSWSY VLL