Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3465 |
Symbol | |
ID | 5210442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4344887 |
End bp | 4345378 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597060 |
Product | NUDIX hydrolase |
Protein accession | YP_001277773 |
Protein GI | 148657568 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.592671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00273603 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTGCAT ATACGCCTAT TCTGGCAACG CTTGGCTATG TCATGTCGCC CGATGGTGCA TCGGTGCTGA TGGTGCACCG CAACGCCCGC CCGGATGATG TCCACTACGG CAAGTACAAC GGTCTGGGCG GGAAACTGCA CTCCCACGAG GATGTCGTGA GTGGCATGAA ACGCGAGATC CGCGAGGAGG CCGGTATCGA GGCGGACGAC CTGGTGCTGC GCGGCGTTCT CAACTGGCCC GGCTTCGGCA AAAACGAAGA GGATTGGTTT GCCTTCGTCT TCCGCATTGA CCGCTGGAGC GGAACGCCGT TCACCAGCAA TCCCGAAGGC GACCTGGAGT GGGTGCCGGT TGCACGCCTG CACGAACTCA ACCTGTGGGA CAATGACCGC CTGTGGATCG ATATGGTCTT CGCGCGTGAT CATCGGACAT TCTTCGGCGT CGCACCCTAC AAGAACGGCA AAATGGTGTC GTGGAGCTAC GTGCTGCTCT GA
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Protein sequence | MPAYTPILAT LGYVMSPDGA SVLMVHRNAR PDDVHYGKYN GLGGKLHSHE DVVSGMKREI REEAGIEADD LVLRGVLNWP GFGKNEEDWF AFVFRIDRWS GTPFTSNPEG DLEWVPVARL HELNLWDNDR LWIDMVFARD HRTFFGVAPY KNGKMVSWSY VLL
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