| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3464 |
|---|
| Symbol | |
|---|
| ID | 5210441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4344284 |
|---|
| End bp | 4344850 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640597059 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001277772 |
|---|
| Protein GI | 148657567 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.918471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00303424 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAG GTGGCGCTAC GGGGTGGAGA ACTCCTCGTC CTTCGCGGAC GCGGGGTTTT
TTATTGAACG ACGGTGATAT GCAACAACGC CTGGCAAACG CTGCGCTGAC GCTGCTCTAT
CGCATCGCCC ACGCAGCGCG CGATCTGCTC TGGAGCGTTG CGCGTCCTTC GCTCCTCGGC
GTGCGTGCGC TTGTCCTGCG CGACAATGAG GTGCTGCTCG TGCGCCATCG CGGCGGCGCC
ACACCCTGGG GATTGCCCGG CGGCGCGGTC GATCCGCATG AGCGGCTGGA AGAGGCGGCA
CGACGCGAGG TCTATGAAGA ATCGGGCGTG CCTGCCGAGT TTCAGCGCGT GCTCGGCGTG
TACGACGCCT TTCGCTTCAC CTTCGTCAAT TACATTATTG TCTTCGTCTT CAAAGCGCAG
GGCAATCCGA CTGCACCGCG TTCAATCGAG ATCGCTGACG CGCGCTTTTT TCCGCTCGAT
GCCCTGCCCG AGGGTATCGA CCCCGGATCG CGCCGCCGGA TCGAGGAATA TCGGTCGGGC
GCAGCCGGGA TTTCAGCACT GTGGTAG
|
|---|
| Protein sequence | MNEGGATGWR TPRPSRTRGF LLNDGDMQQR LANAALTLLY RIAHAARDLL WSVARPSLLG
VRALVLRDNE VLLVRHRGGA TPWGLPGGAV DPHERLEEAA RREVYEESGV PAEFQRVLGV
YDAFRFTFVN YIIVFVFKAQ GNPTAPRSIE IADARFFPLD ALPEGIDPGS RRRIEEYRSG
AAGISALW
|
|---|
| |