Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3459 |
Symbol | |
ID | 5210436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4338815 |
End bp | 4339927 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597054 |
Product | chaperone protein DnaJ |
Protein accession | YP_001277767 |
Protein GI | 148657562 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.013183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTGA AGCGCGATTA CTATGAAGTG TTGGGCGTTC AGCGCAACGC CTCGCAGGAC GAGATCAAGA AGGCGTTCCG TCGTCTGGCG CGCCAGTATC ACCCCGATGT CAATAAAGCG CCAGACGCGG AGGCGAAATT CAAGGAGATC AACGAGGCGT ATGAGGTGCT GTCCGACCCG GAGAAACGGT CCATGTATGA TCGCTTCGGT CACGCCGGTC CTACGGCGGC GCCGGGGTTT GATCCGTTCT CCAGTGCGGA CCCGTTCAGT TCGATCTTTG AAACCTTCTT CGGCGGGACG ATGCGGGGAT CGCAGCGTGG TCCGCAGCGC GGCGCCGATC TGCGCTATAC GTTGTCGATC TCATTTGAAG AGGCCGTCTT CGGCGTTGAA AAGACGATCG AGTTCCGCCG GTTGGAGACC TGTCCCGCAT GCCGTGGCAG CGGCGCTGAG CCGGGTACCG AACCGGTGCG CTGTCCGAAG TGCGGCGGTC TTGGTGAAAT TCGCCAGCGT GCGCCACTCT TCAACATGGT GACGGTGACA ACCTGCGATA TGTGCCGTGG TGAGGGCACG GTGATCGCAA TTCCGTGTCG TGAGTGCCGT GGCGAAGGAC GGGTGCGTCA GACGCGCAAG ATAACAGTGC GCGTTCCGCC TGGCGTCGAT AACTCATCAC AGATTCGGAT CAGCGGTGAG GGGGATGCCG GTCCACGCGG CGGACCATAC GGCAATCTGT ATGTCGTGAT CGACGTGCAA CCGCATCCAT ACTTTATCCG CGAGGGCAAC GACATCATCC TCGAATTGCC GCTCAATGTG GCGCAGGCGG CGCTGGGCGT CGAGGTTGAA GTGCCGACCA TCGACGGCAC GGAGCATCTG CGCATTCCGC CCGGCGTGCA GAGCGGCGCC GTCTTCCGCA TTCGCGGCAA GGGCGTGCCG TTCCTGCGCA GCAGTGGGCG TGGCGACCAG ATCGTTGTGG TGCGCGTCGT CATCCCCACA AATCTGACCG ATCATCAGCG CAGGTTGTTT GAGGAACTCG CGCGCTCGCT CGAAAAGGAA CCGATCGGTG GCCAGCGCGA TGAAGGTTTC TTCGGACGCA TTAAGAATGC GCTCGGTCTG TAG
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Protein sequence | MAVKRDYYEV LGVQRNASQD EIKKAFRRLA RQYHPDVNKA PDAEAKFKEI NEAYEVLSDP EKRSMYDRFG HAGPTAAPGF DPFSSADPFS SIFETFFGGT MRGSQRGPQR GADLRYTLSI SFEEAVFGVE KTIEFRRLET CPACRGSGAE PGTEPVRCPK CGGLGEIRQR APLFNMVTVT TCDMCRGEGT VIAIPCRECR GEGRVRQTRK ITVRVPPGVD NSSQIRISGE GDAGPRGGPY GNLYVVIDVQ PHPYFIREGN DIILELPLNV AQAALGVEVE VPTIDGTEHL RIPPGVQSGA VFRIRGKGVP FLRSSGRGDQ IVVVRVVIPT NLTDHQRRLF EELARSLEKE PIGGQRDEGF FGRIKNALGL
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