| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3454 |
|---|
| Symbol | |
|---|
| ID | 5210431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4334243 |
|---|
| End bp | 4335364 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640597049 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001277762 |
|---|
| Protein GI | 148657557 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0346302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGGAA TCATCATGAT CACTCCTGTC CACGTCGGCA TCATCGGCTG CGGGAATATC
AGCGGCATCT ATCTGGAAAA CAGCAAAATC TTCGACGCGA TCGATGTTGT TGCGGTCGCG
GATATCGATC CGGATCGGGC GCGGGATCGC GCGACACAGT ACGGAATCCC GAAAGCGTGC
AGCGTTGAGG AATTGCTTGC CGATCCCGAC ATCGATCTGG TCGTGAACCT GACCACCCCC
GACGCCCATG GACCGGTGGC GCTGGCAGTG CTGAACGCCG GCAAGCACGT CTACAACGAA
AAACCGCTCG CCGTCACGCG CGACGAAGCC CGTGCGCTCC TCGATCTCGC CGCACAGAAA
GGCTTGCGTG TCGGGTGCGC TCCTGATACG TTCCTTGGCG GTGGATTGCA GACCTGTCGT
AAGTTGATCG ACGATGGCTG GATCGGGGAG CCGATCGGAG CAACCGCGTT CATGATGAGT
CATGGTCCCG AAAGCTGGCA CCCAAACCCG ACCTTTTTCT ACCAGCCTGG CGGTGGTCCG
ATGTTCGATA TGGGTCCCTA CTACCTCACC GCCCTGTGCG TGTTGCTTGG TCCGGTGCAG
CGCGTGACCG GCTCGGCGCG CATTTCCTTC ACCGAACGAA CGATCACCAA TGAGTACAAC
TATGGCGACA AGATTCAGGT CAACACACCC ACACACGTTG CCGGTACGCT CGATTTCGCC
TCTGGTGCGA TCGCAACGAT CATCACCAGT TTCGATGTCT GGGCGTCGCA ATTGCCGCGC
ATCGAGATCT ACGGCTCGCA CGGCACACTG AGCGTGCCGG ATCCGAACAC CTTCGACGGA
CCGGTGTGGT TGCGTCGGGC AGGTGCACGT GAATGGTCAT CCATCCCGCT GTCGCACGGT
TTTACTCGCA ACAGTCGCGG TATCGGTGTG GCTGATATGG CAACCGCGAT CCGGTTGGGG
CGACCACACC GCGCCTCCGG CGAACTGGCG TACCACGTGC TCGACATTAT GCACGCCATT
CACGATGCCT CGCGTGAAGG GCGTCATATC ACCCTGCGCA GCACGATGAC CCGTCCGGCG
CCACTGCCGA CCGGTCTTGG TGAACGGAGC GTAGACCCAT AG
|
|---|
| Protein sequence | MRGIIMITPV HVGIIGCGNI SGIYLENSKI FDAIDVVAVA DIDPDRARDR ATQYGIPKAC
SVEELLADPD IDLVVNLTTP DAHGPVALAV LNAGKHVYNE KPLAVTRDEA RALLDLAAQK
GLRVGCAPDT FLGGGLQTCR KLIDDGWIGE PIGATAFMMS HGPESWHPNP TFFYQPGGGP
MFDMGPYYLT ALCVLLGPVQ RVTGSARISF TERTITNEYN YGDKIQVNTP THVAGTLDFA
SGAIATIITS FDVWASQLPR IEIYGSHGTL SVPDPNTFDG PVWLRRAGAR EWSSIPLSHG
FTRNSRGIGV ADMATAIRLG RPHRASGELA YHVLDIMHAI HDASREGRHI TLRSTMTRPA
PLPTGLGERS VDP
|
|---|
| |