| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3452 |
|---|
| Symbol | |
|---|
| ID | 5210429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4332747 |
|---|
| End bp | 4333343 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640597047 |
|---|
| Product | signal transduction histidine kinase, LytS |
|---|
| Protein accession | YP_001277760 |
|---|
| Protein GI | 148657555 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0334373 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCT CAACAACATC GCAACGTGGC GGATTGAGCA GCACTGCGCT GGCATTGATC
CCGATTGCCA TTGCGATCAA CGTAGCATTG GGTCAGTTGG TGCAGAGTAT TCTGAAGCTG
CCGATCTATC TCGATTCGAT CGGCACCGTG CTGGTTGGCG TTCTGCTGGG ACCGCTGGCG
GGAGCGATCA CCGGTTTGCT CGCCAATATC ATCTGGGGAT TGACACTGGC ACCATCCGCG
TTGCCATTTG CCGCGGTTGC AGCGGTAATC GGCCTGATCG CCGGGTATGC CGGGCAGTAT
GGCGCTGCGC AGTCATGGTG GAAAATGGCA CTCTTTGGGG TGCTGACCGG AATTGTGGCG
GCGGCGATCT CGGCGCCGAT TGCAACATAT GTGTTTGGCG GTGTGACCGG CGGGGGCACG
GATGTGCTGG TAGCCATGTT CCAGAACCTT GGGGCAAGTG TGCTGGGAGC ATCATTTGCC
CAGGGCGCGG TTTCCGATCC GCTTGACAAA ACCATCACAT ACCTTGTCGT GTGGGCAATC
ATCAGCGCGT TGCCCAGACG ATTGCTGGCA CGCTTCGGCA ATATCCAGCA ACGGTAG
|
|---|
| Protein sequence | MATSTTSQRG GLSSTALALI PIAIAINVAL GQLVQSILKL PIYLDSIGTV LVGVLLGPLA
GAITGLLANI IWGLTLAPSA LPFAAVAAVI GLIAGYAGQY GAAQSWWKMA LFGVLTGIVA
AAISAPIATY VFGGVTGGGT DVLVAMFQNL GASVLGASFA QGAVSDPLDK TITYLVVWAI
ISALPRRLLA RFGNIQQR
|
|---|
| |