Gene RoseRS_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3450 
Symbol 
ID5210427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4329779 
End bp4331527 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content62% 
IMG OID640597045 
ProductABC transporter related 
Protein accessionYP_001277758 
Protein GI148657553 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0164337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCTG TAATCAATAA CCATATGTCC GATTGTTCAG CAACGAACTC GATCATCATG 
CTGCGTGACG CCACGTTTAC CTATGCTGGC GCTTCCAGAC CGGCGTTGCG CGCAGTCACA
CTGGCTGTGC CTGCCGGTCA GATCTGTGCA ATTATCGGCA AGGCAGGGGC GGGCAAAAGC
ACGCTCTGCG CGCTGTGTGC CGGGTTTGTG CCGCACTTTT TTCGGGGACG GCTCAGCGGT
GATGTGATTG TCGATGGCGT ATCGGTCGCC GACCACCCGA TTGCCGAACT GGTGCGCCAT
GTTGCGCTGG TCGGCAGTAA CGCCTTCAGC CAGATATCCG GCGCGCGGTT CACCGTGTAC
GATGAGGTGG CGTTTGGTCT GGAAAATCTG GGCGTGCCGC GCCCTGAGAT GATCGAGCGT
GTGGAATGGG CGCTCCGTGC GCTTGGTATT GAGCAGTTGC GCGATCGTTC GCCCTACGCG
CTCTCCGGCG GTCAACAGCA GCGCATGGTC ATTGCCGCTG CACTGGCGAT GCGTCCGCCG
GTTCTGGCGC TCGATGAACC AACGATGCAG CTTGACCCGC CCGCGATGAT GGAATTGAGC
GCCGTGCTTC GTTCGCTGGC TCAGCAGGGC ATCACGATTC TGGTAGCTGA GCATCGCCTC
GAATGGGTCG CCGACGTGGC TGACCGGGTG GTGGCGCTGG ATCAGGGTAC GATCATCGCC
GACGGCGCAC CGACTGACGT GTTGACCGAT CCACGTCTGT GCGAGACTGG TATCGGGTGG
CCCCGACCGA CACGGATTGC TGACCGCGCG CGTGCTGAAG GTCGCTGGCT GTCGGAGCGT
CCGCTGCCGA TCACGATGGC GGATCTGGCG GAAGGGCTGC GTATGGCAGA GGACGAGAAC
CGCCTCACGA ATGAACCAGA CCGCGCCACA CACGCATCAA TGATACGGAC GAATGACAGC
GCCAGAAACC TGGCGTTGCC GCCCCGCGTC CCTGACGCCG AACCGATTGT CACGCTCGAT
GAGGTGCATT TTACCTACCC GAACGGCGTC GAGGCATTGC GTGGCGTCTC GCTGACACTG
CAACGCGGCG AACGCATTGC GCTGGTCGGT CGGAATGGCG CGGGCAAAAG CACGCTGGTG
CGCCATCTGA ACGGTTTACT GCGTCCATCG CACGGTCGCG CACTGGTTGG CGGCGTGGAC
ACGCGCACAA CAACAGTCGC GCGTTGCGCC CGGCATGTTG GGATCGTCTT TCAGGATGTG
CGCAATCAAC TCTTTGCCCG CACGGTGCGC GAGGAGGTTC GTTTCGGACC GCGTAATCTC
GGTTTTACAC CCGACCGGAT CGATGCCCTG ACAGAAAGGG CCGTCGACGC GCTGGAACTG
CGGGACGTCA TCGATGAACA TCCGTATGAC CTGCCGCCTG CCCGCCGTCG TCTGGTTGCG
ATTGCGGCAG TGCTGGCGAT GGACACGCCG CTGCTGGTGC TTGATGAACC GACAGCCGGG
CTGGACAATG CCGCCATTGC ACTCCTGGCG CGTCTTATCG CCGATCTTGC GCTGCAGCAG
CGGAGTGTCC TGATCGTGAG CCACGATCTC GATTTTTGCT ACGAAACGCT GGATCGCGTC
ATTCTGCTGC GTGATGGTCG GGTTGCGCTC GATGCCCATT TCGCCGGGCT GGATCATGCG
GAAGCAGCAG TGCTCCGTGA CGACGTCGGC TTGCCAATCG AGGTGCGTCT GCGCTACGTC
AACGTATAA
 
Protein sequence
MPSVINNHMS DCSATNSIIM LRDATFTYAG ASRPALRAVT LAVPAGQICA IIGKAGAGKS 
TLCALCAGFV PHFFRGRLSG DVIVDGVSVA DHPIAELVRH VALVGSNAFS QISGARFTVY
DEVAFGLENL GVPRPEMIER VEWALRALGI EQLRDRSPYA LSGGQQQRMV IAAALAMRPP
VLALDEPTMQ LDPPAMMELS AVLRSLAQQG ITILVAEHRL EWVADVADRV VALDQGTIIA
DGAPTDVLTD PRLCETGIGW PRPTRIADRA RAEGRWLSER PLPITMADLA EGLRMAEDEN
RLTNEPDRAT HASMIRTNDS ARNLALPPRV PDAEPIVTLD EVHFTYPNGV EALRGVSLTL
QRGERIALVG RNGAGKSTLV RHLNGLLRPS HGRALVGGVD TRTTTVARCA RHVGIVFQDV
RNQLFARTVR EEVRFGPRNL GFTPDRIDAL TERAVDALEL RDVIDEHPYD LPPARRRLVA
IAAVLAMDTP LLVLDEPTAG LDNAAIALLA RLIADLALQQ RSVLIVSHDL DFCYETLDRV
ILLRDGRVAL DAHFAGLDHA EAAVLRDDVG LPIEVRLRYV NV