| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3438 |
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| Symbol | |
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| ID | 5210415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4311519 |
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| End bp | 4314641 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597033 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001277746 |
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| Protein GI | 148657541 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.160486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAG ACGCCATCGT TATCAAGGGT GCGCGTGAGC ACAATCTGAA GGGCATCGAC
CTCGAAATCC CACGCGACAA ACTGGTTGTG CTGACCGGCG TCTCAGGTTC GGGAAAGTCG
TCGCTGGCGT TCGATACGCT GTATGCCGAA GGACAGCGCC GGTACGTCGA GTCGCTCTCG
GCATACGCCC GTCAGTTTCT CGGGCAGATG GAGAAGCCGA AAGTCGATTA CATCGGCGGT
CTCTCGCCGG CGATTGCCAT CGAGCAGAAG AGCGCGTCGA AGAATCCGCG CTCGACCGTC
GGCACCGTCA CCGAGATCTA CGACTATCTG CGCCTGCTGT ACGCTCGCGT TGGAACGCAG
CACTGCCACA TGTGCGGGCG ACCGGTCAGT TCGCAAAGCG CCGAGCAGAT CGTCAACCGC
GTGCTGACGT TGCCGGCTGG CACACGCTTC ATGGTGCTGG CGCCGCTCGT GTCGCAACGC
AAAGGCGAGT ACAAGGACGT GTTCGCCGAA GCGCGCGCCG AGGGATTCGC GCGGGTGCGC
GTCGATGGCG AAATACGCGA CCTGGCAAGC GAAATCAAAC TCAACAAGAA GGTCAAGCAT
ACTATCGAGA TTGTGGTTGA TCGTTTGACC ATACTGGCAC GCGAAGGTGC AACCGATCAG
TCGCATGTTC CGAGCGCCCC GATCGGAAAA GCGCAGGCAG GGGCGCAGAG CGATTGGGAT
GCATTCGTCT CTCGCCTGAC CGATAGTGTC GAACAGGCGC TGCGTGTTGG CGAGGGGCAA
CTGGTTATCA GCATCCAGAA TCCATCCGGT GGCACAGAAG AATGGTTGAT GAGCGAAGCC
AACACCTGCG TCCACTGTGG CATTTCGTTT CCTGAACTGT CGCCGCAGAT GTTTTCGTTC
AACAGTCCGC AGGGCGCCTG CCCCGAATGC ACCGGTCTCG GCGTTCGGAT GGAGGTGGAC
CCGCTGCTGC TCGTGCCCAA CCCATCATTG ACCCTGCACG AGGGTGCGGT GACCTACTGG
GGCGAACTGC GCAAGAAACG CGATTCGTGG GGGTACCGGG CGTTGCTGGC AATTGCGCAT
CACTACGGCT TCGATCTCGA TACGCCATGG GAACAACTCA GCGAGCAGGC ACGCCACGTC
ATTATCTATG GCAGCGGAAA GGAACGAATT CGCTTTCGCT GGGGCGACGA AACCAGTGAT
AGTCGTGGTG AGTTCATGCG TCCCTGGGAG GGACTGGCAA GTGAAATTCG TCGCCGCTAT
CAACAGACCG GCAGTGATTA CACCCGCGAG TATTACCAGA GTTTTATGAG CGAACAACCC
TGCCCGGCAT GCGACGGTGC GCGTCTGCGC CCCGAAAGCC TGGCGGTCAG GGTCGGCGGG
TGGTCGCTGC GCGATGTGAC GCGCCTGACG ATTACCGGTG CGATGGCATG GGTGCACGCC
CTGAGCGGCA TGCCGGTAGA CCCGTCGCAT CTGGCGGCAT TGAACGGGCA TGTCGCAGGC
AATGGCGCCA TACCCCACCT CAGTGTGACA CCACTGAGCG ACTACCAGAT GGCGATTGTC
AGCGATGTGC TCAAGGAGAT CCGCGAGCGC CTGGGGTTCC TGCTCAATGT CGGTCTGCAT
TACCTCACCC TCGAACGCCC CGCGCCAACC CTCTCCGGCG GCGAGGCGCA GCGTATTCGC
CTGGCATCAC AGATCGGCTC CGGTCTCGTC GGCGTCACCT ATATCCTCGA TGAACCGAGC
ATCGGGCTGC ACCAGCGCGA CAATCGCAAA CTGCTCGATA CGCTGCTGAA ACTGCGCGAT
CTGGGCAATA CCGTCGTCGT CGTCGAGCAC GACCTGGAAA CCATGCAGGC GGCTGACTGG
ATCATCGACT TCGGTCCTGG GGCAGGCGTC AAGGGGGGCG AGGTGGTCGC AGCCGGTCCT
CCTGACCTGA TCGCCGCAAA CCCTGGCTCC CTGACCGGCG CATACCTGTC CGGGCGATTG
GACATTCCGA TCCCGCAGCA GCGCCGCACT GCGCGGGTGC GCCCGGTTGC CGATACGGCG
CAGGACGCGC CGCGCCGTCG TCGCCGGACT GATCACGCAA CCGACCAGGC GGATGGTCCG
TGGCTCGAAC TCGAAGGCGC AACCATGAAT AATCTGCGCG ACGTGACCGT TCGTTTTCCG
CTCGGCGTCT TCATCTGCGT GACCGGCGTC TCCGGGTCGG GAAAATCATC GCTGATCACC
GAAACGCTCT ACCCTGCGCT GGCAAACCGC CTGAACCGCG CGCAGTTGAA GCCGGGACCG
TTCCGTACAT TGCGTGGGCT GGAACATCTC GATAAGGTGA TCGATATCGA CCAGCAACCG
ATTGGGCGAA CCCCGCGCTC CAACCCGGCA ACATACGTCA AACTGTTCGA CCTGATCCGC
GAACTGTTCG CTTCGACCAA TGAGGCGAAA CTGCGCGGCT ACAACGCCGG GCGCTTTTCG
TTCAACCTGA AGGGCGGGCG TTGCGAAGCC TGCGAGGGGA ATGGCGAAAA GCGCATCGAC
ATGCAGTTCC TGGCGGATGT CTGGGTGCGC TGCGATGTCT GTAAGGGGAA ACGGTACAAC
CGTGAAACAT TGCAGGTCAG GTACAAGGGC AAGTCCATTG CTGACGTGCT CGACATGGAC
GTGCAGACGG CGCTGGAGTT CTTCGACAAT GTGCCGCGCA TCAGGCGCAT CCTGCAAACG
CTCCACGACG TCGGTCTGGA CTACATCAAA CTCGGTCAGT CGGCGACGAC CCTTTCCGGC
GGCGAGGCGC AGCGGGTGAA ACTGGCGAAA GAACTGGCGC GCACTGCTAC CGGTCGCACC
ATGTATATTC TGGATGAACC AACGACCGGG CTGCACTTCG CCGATGTACA ACGCCTGTTG
ACAGTGCTGC ACCGCCTGGT CGATGCAGGC AACACCGTGC TCGTCATCGA GCACAACCTG
GACGTTATCA AAACCGCAGA CTGGATCATC GACATGGGAC CGGAAGGCGG CGACGGGGGT
GGCAGAGTCG TGGCGACCGG CACACCCGAA GAAGTGGCGC TGATCGAGGA GTCGCACACC
GGTCGATTCC TGCGCGAGAT CCTGCACCAC CACAACATCG TTGCCAGGGG CGTGCTTGAG
TGA
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| Protein sequence | MAKDAIVIKG AREHNLKGID LEIPRDKLVV LTGVSGSGKS SLAFDTLYAE GQRRYVESLS
AYARQFLGQM EKPKVDYIGG LSPAIAIEQK SASKNPRSTV GTVTEIYDYL RLLYARVGTQ
HCHMCGRPVS SQSAEQIVNR VLTLPAGTRF MVLAPLVSQR KGEYKDVFAE ARAEGFARVR
VDGEIRDLAS EIKLNKKVKH TIEIVVDRLT ILAREGATDQ SHVPSAPIGK AQAGAQSDWD
AFVSRLTDSV EQALRVGEGQ LVISIQNPSG GTEEWLMSEA NTCVHCGISF PELSPQMFSF
NSPQGACPEC TGLGVRMEVD PLLLVPNPSL TLHEGAVTYW GELRKKRDSW GYRALLAIAH
HYGFDLDTPW EQLSEQARHV IIYGSGKERI RFRWGDETSD SRGEFMRPWE GLASEIRRRY
QQTGSDYTRE YYQSFMSEQP CPACDGARLR PESLAVRVGG WSLRDVTRLT ITGAMAWVHA
LSGMPVDPSH LAALNGHVAG NGAIPHLSVT PLSDYQMAIV SDVLKEIRER LGFLLNVGLH
YLTLERPAPT LSGGEAQRIR LASQIGSGLV GVTYILDEPS IGLHQRDNRK LLDTLLKLRD
LGNTVVVVEH DLETMQAADW IIDFGPGAGV KGGEVVAAGP PDLIAANPGS LTGAYLSGRL
DIPIPQQRRT ARVRPVADTA QDAPRRRRRT DHATDQADGP WLELEGATMN NLRDVTVRFP
LGVFICVTGV SGSGKSSLIT ETLYPALANR LNRAQLKPGP FRTLRGLEHL DKVIDIDQQP
IGRTPRSNPA TYVKLFDLIR ELFASTNEAK LRGYNAGRFS FNLKGGRCEA CEGNGEKRID
MQFLADVWVR CDVCKGKRYN RETLQVRYKG KSIADVLDMD VQTALEFFDN VPRIRRILQT
LHDVGLDYIK LGQSATTLSG GEAQRVKLAK ELARTATGRT MYILDEPTTG LHFADVQRLL
TVLHRLVDAG NTVLVIEHNL DVIKTADWII DMGPEGGDGG GRVVATGTPE EVALIEESHT
GRFLREILHH HNIVARGVLE
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