Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3430 |
Symbol | |
ID | 5210407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4302273 |
End bp | 4304807 |
Gene Length | 2535 bp |
Protein Length | 844 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597025 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001277738 |
Protein GI | 148657533 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0824413 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGTG CATTGATGAC CATCGAACAA TGGTTTGCGC GTCGGGGGTG GGAACCATTT CCCTTCCAGC GTGAGGTCTG GCAGGCGTAT CTGGCAGGCG AAAGTGGCCT GATCCACGCC ACCACCGGCG CAGGCAAAAC ATACGCTGCC TGGATGGGTC CGATCGCAGA GTGGCTGGCA TCCACACCGT CTGACCGCGC CGCGCCGTCG CTGCAGGTTC TGTGGATCAC GCCGCTGCGC GCGCTGGCTG CCGATACGGT CGAGGCGCTC CGTGCGCCGC TCGATGACCT CGGCGTTCCC TGGCAGGTCG AAGCGCGCAC CGGCGACACC CCCGCCGCCA CGCGCGCCCG TCAGCGTCGG CGCCTGCCGA CTGCGCTGGT GACAACTCCC GAAAGTCTCT CGCTGCTGCT CACCCAACCC GAGTGGCGCG ATCTGTTCGC CGACCTGCGG ATGATCGTCG TTGATGAATG GCACGAACTC CTCTCGACCA AACGCGGCGT TCAGGTCGAA CTGGCGCTGG CGCGACTCCG TGGATTGCGT CCTTCCGTGC GCATCTGGGG ACTTTCGGCG ACAATGGGCA ACCTGGACCA GGCGCTGGAT GCGCTTCTTC CTGCGGCGAC CGAACAACCG TCGCGCGGCA GGATCGTGCG CGGTCTGATC CCCAAGCCGA TTGTGATCGA GACCTTGCTG CCTGAGACTA TCGAACGCTT CCCGTGGGCG GGACACCTGG GCTTGCAATT GCTGCCGCAG GTCGTGGCGA AGATTGAGCA GAGCGCGACA ACGCTGGTCT TTACCAACAC GCGCGCACAG GCGGAGATCT GGTACCAGGC ATTGCTGGAT GCGCGCCCGG ATTGGGCTGG TACGCTGGCG CTCCACCACG GCTCTCTGGA CCGCGAGGTG CGTGAGTGGG TCGAAGCGGC GCTGCGCGCC CGGCGCCTGC GCTGTGTGGT ATGCACCTCT ACGCTCGATC TCGGCGTCGA TTTCTCACCC GTCGATCAGG TCATTCAGAT TGGCAGTCCC AAGGGAATTG CACGTCTGAT GCAACGCGCC GGGCGGAGCG GTCATCGACC TGGCGCTGTC AGCATCGTCA CGTTCGCTCC CGCCAGTGCG CTGGAACTGA TCGAAATCGC AGCAGCGCGC GATGCCATCG CACACGATTG GATCGAAACT CGCCATCCAC TCGAAGCGCC GCTCGATGTG CTCGTGCAAC ACCTGGTGAC CTGTGCGTTG GGCGGTGGTT TTGTCGGCAG TGAACTGCTT GCCGAAGTGC GCACTACCCG CGCCTTCCGC AACCTGAGCG ACGCCGAATG GCAGTGGGCG CTCGATTTTG TGGTGCAGGG CGGCGCATCA CTGCGCGCCT ATCCAGAATT TCATCGTGTC ATCGAACGCG ATGGGCGCTA TGTTGTCACC AATGACGCCG TCGCGCGACG GCATCGGGTC AGCATTGGCA CAATCGTGAG CGATTCGGCG CTCAAGGTGC AGTATGTTCG GGGTGGAACG CTCGGCGTGG TCGAAGAGTC ATTTGCAGCT CGCTTGAAGC CGGGAGACAT CTTTTTCTTC GGCGGCAAGG CGCTGGAGTT CGTGCAGTTG CGCGATATGA CCGTATTCGT GCGCAAGACG GAACGGCGTG ATGGGGTCAC GCCGCGCTGG ATGGGGGGAC GTATGCCGCT CTCGACGGAA CTGTCTCACG CGATCCGTGC GCGGATCGAA GCGGCGCGCA GCGGCGTCTT TCGTGATGCC GAGATGGAGG CGGTGCGACC GCTGCTGGAC GTGCAGGCGC AGTGGTCGCT GCTTCCAGCC GCCGACGAAC TGCTGATCGA GCGGACGCAG ACCCGCGAGG GGCATCATCT CTTTGTCTAC CCGTTCGAGG GGCGCCTGGT GCATGAAGGC ATGGCTGCGC TGATCGCATA TCGTCTCAGT CGCCTGCGTC CCATCACGTT CACCCTGGCG ATGAACGATT ACGGCTTCGA GTTGCTCGCG CCGGAACCGG CGCCGCTGTC AGAAGCGCCT GGTATCATGC TCGACACCAC CCACAGCGCA CGGCGATGGG AGATAAGCGG TGCGCACATG CCACTCTTCG GCATCGATCA TCTGGCGGAC GACATCATCG CCAGCATGAA CGCAACCGAA ATGGCAAAGC GCCAGTTCCG CGAGATTGCG AGGATTGCCG GACTGGTGTA CGAAGGATAC CCCGGCGAGA AGAGCGCACG GCAAATTCAG GCATCAAGCA GCCTGATGTA TGATGTGTTC GCGCAGTATG ATCCAGAGAA CCGACTGCTG GAACAGGCGC GACGCGAAGT GCTGGAACGC CAGTTAGAGC ACAGTCGCCT GGCGATGGCG CTGAGGCGCA TTGCTGCAGG ACGGATCATC GTCGTCGATG TTCCCCGTCC GACGCCGTTC GCATTTCCGC TGCTCGTCGA CCGGTTGCGG GAAAGTCTCA GTTCTGAAAA ACTGGCGGAT CGGGTGCGCA AGATGCAACT GGCGCTGGAA CGCGAGGCGG GGATGGTTCC AGGAAAGGAT CGGCAGACCA CCTGA
|
Protein sequence | MNRALMTIEQ WFARRGWEPF PFQREVWQAY LAGESGLIHA TTGAGKTYAA WMGPIAEWLA STPSDRAAPS LQVLWITPLR ALAADTVEAL RAPLDDLGVP WQVEARTGDT PAATRARQRR RLPTALVTTP ESLSLLLTQP EWRDLFADLR MIVVDEWHEL LSTKRGVQVE LALARLRGLR PSVRIWGLSA TMGNLDQALD ALLPAATEQP SRGRIVRGLI PKPIVIETLL PETIERFPWA GHLGLQLLPQ VVAKIEQSAT TLVFTNTRAQ AEIWYQALLD ARPDWAGTLA LHHGSLDREV REWVEAALRA RRLRCVVCTS TLDLGVDFSP VDQVIQIGSP KGIARLMQRA GRSGHRPGAV SIVTFAPASA LELIEIAAAR DAIAHDWIET RHPLEAPLDV LVQHLVTCAL GGGFVGSELL AEVRTTRAFR NLSDAEWQWA LDFVVQGGAS LRAYPEFHRV IERDGRYVVT NDAVARRHRV SIGTIVSDSA LKVQYVRGGT LGVVEESFAA RLKPGDIFFF GGKALEFVQL RDMTVFVRKT ERRDGVTPRW MGGRMPLSTE LSHAIRARIE AARSGVFRDA EMEAVRPLLD VQAQWSLLPA ADELLIERTQ TREGHHLFVY PFEGRLVHEG MAALIAYRLS RLRPITFTLA MNDYGFELLA PEPAPLSEAP GIMLDTTHSA RRWEISGAHM PLFGIDHLAD DIIASMNATE MAKRQFREIA RIAGLVYEGY PGEKSARQIQ ASSSLMYDVF AQYDPENRLL EQARREVLER QLEHSRLAMA LRRIAAGRII VVDVPRPTPF AFPLLVDRLR ESLSSEKLAD RVRKMQLALE REAGMVPGKD RQTT
|
| |