Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3413 |
Symbol | |
ID | 5210390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4284104 |
End bp | 4284889 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597008 |
Product | biotin/lipoate A/B protein ligase |
Protein accession | YP_001277721 |
Protein GI | 148657516 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0095] Lipoate-protein ligase A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0322711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.107721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTC CATCATCATC GCCCTGGCGC GCATATGACT GGCAGTTGAT CCAGAGCGCG CCGATCCATC CGGTCATGCA CATGGCGCTC GACGAGGCGT TGTTGGAGGA AGTGGCTGCC GGGCGGCGCA AGCCGACGCT GCGTATCTGG GAATGGGCGG CAAGCGCCGT GGTCATCGGG CGTTTCCAGT CACTGCGCAA CGAGGTCGAT CTCGAAAGCG CACGACGCTA CCAGGTGCAG GTTGTCCGCC GCATCACCGG CGGCGGAGCG ATGTTCATCG AACCGGGCAA TACGATCACC TATTCGATCT ACGCCCCGGT CGAACTGGTG GCAGGTATGA GCATGGTCGA CTCATACGCC TTCTGCGATC GGTGGGTGCT CGACGCGCTG GCATCACTCG GCGTGGAGGC GTGGTACCAG CCGATCAACG ACATCACCTC GGCAGCTGGC AAGATCGGCG GGGCGGCGCA AACGCGGCGC AATGGCGCGG TGCTGCACCA CGTGACGATG GCATACGATA TCGACAGCGC CAGGATGCTG GAGATCCTGC GGATCGGGCG TGAGAAACTC AGCGACAAGG GGATCGCCAG CGCCGCCAAA CGGGTCGATC CGCTCCGCCG CCAGACCGGA TTGCCGCGCG AGGCGATCAT CGCGCGGATG ATCGAGACCT TCCGCGCTCA GCATGGGCTG ACCGAATCGG CGATCACACC AGACGAATGG GAAGCGGCAG AACGACTGGT CGAAACAAAA TTCGGCACAG AGGCGTGGTT GCGTGCCATA CCATGA
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Protein sequence | MSIPSSSPWR AYDWQLIQSA PIHPVMHMAL DEALLEEVAA GRRKPTLRIW EWAASAVVIG RFQSLRNEVD LESARRYQVQ VVRRITGGGA MFIEPGNTIT YSIYAPVELV AGMSMVDSYA FCDRWVLDAL ASLGVEAWYQ PINDITSAAG KIGGAAQTRR NGAVLHHVTM AYDIDSARML EILRIGREKL SDKGIASAAK RVDPLRRQTG LPREAIIARM IETFRAQHGL TESAITPDEW EAAERLVETK FGTEAWLRAI P
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