Gene RoseRS_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3413 
Symbol 
ID5210390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4284104 
End bp4284889 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID640597008 
Productbiotin/lipoate A/B protein ligase 
Protein accessionYP_001277721 
Protein GI148657516 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0322711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.107721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC CATCATCATC GCCCTGGCGC GCATATGACT GGCAGTTGAT CCAGAGCGCG 
CCGATCCATC CGGTCATGCA CATGGCGCTC GACGAGGCGT TGTTGGAGGA AGTGGCTGCC
GGGCGGCGCA AGCCGACGCT GCGTATCTGG GAATGGGCGG CAAGCGCCGT GGTCATCGGG
CGTTTCCAGT CACTGCGCAA CGAGGTCGAT CTCGAAAGCG CACGACGCTA CCAGGTGCAG
GTTGTCCGCC GCATCACCGG CGGCGGAGCG ATGTTCATCG AACCGGGCAA TACGATCACC
TATTCGATCT ACGCCCCGGT CGAACTGGTG GCAGGTATGA GCATGGTCGA CTCATACGCC
TTCTGCGATC GGTGGGTGCT CGACGCGCTG GCATCACTCG GCGTGGAGGC GTGGTACCAG
CCGATCAACG ACATCACCTC GGCAGCTGGC AAGATCGGCG GGGCGGCGCA AACGCGGCGC
AATGGCGCGG TGCTGCACCA CGTGACGATG GCATACGATA TCGACAGCGC CAGGATGCTG
GAGATCCTGC GGATCGGGCG TGAGAAACTC AGCGACAAGG GGATCGCCAG CGCCGCCAAA
CGGGTCGATC CGCTCCGCCG CCAGACCGGA TTGCCGCGCG AGGCGATCAT CGCGCGGATG
ATCGAGACCT TCCGCGCTCA GCATGGGCTG ACCGAATCGG CGATCACACC AGACGAATGG
GAAGCGGCAG AACGACTGGT CGAAACAAAA TTCGGCACAG AGGCGTGGTT GCGTGCCATA
CCATGA
 
Protein sequence
MSIPSSSPWR AYDWQLIQSA PIHPVMHMAL DEALLEEVAA GRRKPTLRIW EWAASAVVIG 
RFQSLRNEVD LESARRYQVQ VVRRITGGGA MFIEPGNTIT YSIYAPVELV AGMSMVDSYA
FCDRWVLDAL ASLGVEAWYQ PINDITSAAG KIGGAAQTRR NGAVLHHVTM AYDIDSARML
EILRIGREKL SDKGIASAAK RVDPLRRQTG LPREAIIARM IETFRAQHGL TESAITPDEW
EAAERLVETK FGTEAWLRAI P