| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3410 |
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| Symbol | |
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| ID | 5210387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4280945 |
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| End bp | 4282615 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640597005 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001277718 |
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| Protein GI | 148657513 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.802721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.621844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA TCGTCACTGC TGAACAAATG CGCGCCATCG AAGAAGCGGC GGTCGCCCGT
GGCGCTACAT GGTCAGGATT GATGGAACAG GCTGGCGCCG GTGTGGCGCG TGTCGCCCTC
GAAGTCTCCG GCGATCCTGT GGGTCGTCGC GCGCTGGTGC TGGTCGGTCC GGGCAACAAC
GGCGGGGATG GGTTGGTGGC AGCGCGTCTG CTGCACGATG CTGGCATGCA GGTAACGCTG
TTCGTCTGGC GACGACGTGA GACTGTCGAG GACATCAACT GGCGGTTGTG TCGCGAACGC
GCTATCACCG AACTGGCTGC CGCCGATGAT CCGCAGGGTG CTGCGCTGCG GGCATCGCTT
GCCAGGGTGG ATCTGGTGAT CGATGCGTTG CTGGGGTATG GCGCCAATCG CCCGGTGGAA
GGCGAACTGG CGATGATTAT CGCCACGCTG AATGCGGCGA GGGCAACCGA TGCGCGCCGG
ACGAAACCAT ACGTTCTGGC GATCGATGTG CCTACCGGTG TTCACGCCGA TAGCGGCGCC
GTGCTCGGCA ATGCAGTGCG CGCCGACCTG ACCGTTTCGA CCGGTCCTGT CAAGCGTGGG
TTGTTGTTCT ACCCGGCGCG CGCATACGCT GGCGTGCTGC GCAGCGTCGA TATCGGGCTT
TCGCCCGCCG ATCTGGAGAG TGTGATGACC GACATGATCG ATATAGAACT GGCGCGCTCG
CTCCTTCCAC CCCGTCCGCC CGACTCGCAC AAGGGTACGT TCGGCAAGGT GCTGGTCGTT
GCCGGATCGA TAAACTACCC CGGTGCAGCG ACGCTTGCGA CCGCCGGAGC GGCGCGTGTC
GGCGCCGGTC TGGTGACGCT TGCGGTTGGG CGGAGTCAGG TGTACAGTCC AGGGCGCCTC
CCCGAAATCA CGTTGCACAT CCTTCCCGAA GCCGAACCGG GGGTGGTCGG CGATGCCGCT
GCCGACGAGG TGCTCTCCAT CCTCGAAGGG TATCAGGCGC TGCTTGTCGG TCCTGGTTTG
GGGCGCGAGA AGGCGACACG TGCGTTTCTT GAGCGGTTGC TGGGATTGCA ATCACCGCGT
CATCGTGGAC AGATCGGGTT TCGGATCGCC GCAGCTGGCA GCGAAAAACC GGTGGTCAAG
CAGCGACCAG AATTGCCGTT TACTGTGATC GACGCCGATG GGTTGAATAT TCTGGCAGAC
CTGATCCATC ACCCTGAAGC GACCGATGCC GCGTCTGGCA CGATCTGGAA CCGTCTGCCG
CGCGGCAGGT GCGTGTTGAC GCCGCATCCA GGCGAGATGC GGCGTCTGCT TGGCGTCGAG
GAATTGACCG GTCATCCGGT CGATGTGGCG AAGGAAGCGG CGATGCACTG GCAGCAGGTA
GTCGTGCTCA AAGGCGCCAC GACGGTCATT GCCGATCCGG AGGGTCGAGT GCGCGTCAAC
GATGGAGGAA ACCCGGCGCT GGCAACCGCC GGAACCGGCG ACGTGCTGGC GGGCGCCATC
GCCGGGTTGC TGGCGCAGGG GCTGGCGCCG TTCGATGCAG CGACACTTGG CGTCTATCTC
CACAGCGCAG CCGGTCGCCT GGTGCGCGAC GAACTCGGCG ATATGGGCGC ACTTGCGGGT
GATCTGCTCC CGCGTCTACC GCTGGCGATC CGCGCACTAA AACAGCCATG A
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| Protein sequence | MSKIVTAEQM RAIEEAAVAR GATWSGLMEQ AGAGVARVAL EVSGDPVGRR ALVLVGPGNN
GGDGLVAARL LHDAGMQVTL FVWRRRETVE DINWRLCRER AITELAAADD PQGAALRASL
ARVDLVIDAL LGYGANRPVE GELAMIIATL NAARATDARR TKPYVLAIDV PTGVHADSGA
VLGNAVRADL TVSTGPVKRG LLFYPARAYA GVLRSVDIGL SPADLESVMT DMIDIELARS
LLPPRPPDSH KGTFGKVLVV AGSINYPGAA TLATAGAARV GAGLVTLAVG RSQVYSPGRL
PEITLHILPE AEPGVVGDAA ADEVLSILEG YQALLVGPGL GREKATRAFL ERLLGLQSPR
HRGQIGFRIA AAGSEKPVVK QRPELPFTVI DADGLNILAD LIHHPEATDA ASGTIWNRLP
RGRCVLTPHP GEMRRLLGVE ELTGHPVDVA KEAAMHWQQV VVLKGATTVI ADPEGRVRVN
DGGNPALATA GTGDVLAGAI AGLLAQGLAP FDAATLGVYL HSAAGRLVRD ELGDMGALAG
DLLPRLPLAI RALKQP
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