Gene RoseRS_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3401 
Symbol 
ID5210378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4275220 
End bp4275675 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content57% 
IMG OID640596996 
Productsingle-strand binding protein 
Protein accessionYP_001277709 
Protein GI148657504 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.413025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.54881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGG ATCTCAACAA GGTGATGATC ATCGGGCGTC TCGGTAAAGA CCCTGAGATG 
CGCTATACGC CTGGTGGAAG CCCTGTAACG ACGTTCAGCG TCGCGACAGG ACGGCAGTGG
AAAGACGGCA GCGGCGAATT GCACGAGGAG ACGGAATGGT TCAATGTAGT GACCTGGAAT
AAACTGGCCG AGATCTGCCA CGAGCACCTG CGCAAATCCA GTCGCGTCTA TATCGAAGGG
CGCCTCCAGA CTCGCCATTG GGAGGATCAG AACGGGGTGA CGCATTACCG CACTGAGGTT
GTGGCGAGCG ATATGATCAT GCTCGACAGT CGCGGTCCTC GTGAGTCGTC GCAGTATGGC
GATGAGCCGC CGTATCATCA CCCCGATCAT CGCCCTCAGC GCGGGCAGCA GTCGAAGGAC
GATTTTGCCA TTGGTGATGA GGATATTCCG TTTTAG
 
Protein sequence
MAKDLNKVMI IGRLGKDPEM RYTPGGSPVT TFSVATGRQW KDGSGELHEE TEWFNVVTWN 
KLAEICHEHL RKSSRVYIEG RLQTRHWEDQ NGVTHYRTEV VASDMIMLDS RGPRESSQYG
DEPPYHHPDH RPQRGQQSKD DFAIGDEDIP F