Gene RoseRS_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3386 
Symbol 
ID5210363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4252664 
End bp4253356 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content59% 
IMG OID640596982 
ProductFHA domain-containing protein 
Protein accessionYP_001277695 
Protein GI148657490 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0029589 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0414259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAC CCCATTTGAC CGTAATCAGC GGTCCCCGAC AGGGGATGCA GGTTTCCATG 
GATGTTTCGC CTTTCACCCT GGGGCGGGGA ACAGACAACA CGCTTTCTCT GCCCGACCCG
ACCATTTCCA GCCATCATGC CCGTATCGTG GAACACATCG GCCTGTACTG GCTGGAAGAT
TTGGGCAGCA CCAACGGCAC ATACTTTTTG CCACCACGCG GCGAAGAATT CCGCCTGGCG
AAAGACAAGC CCGTCCTGCT GGTGGAGGGC GCTCGCATCC GCCTGGGTGG TCATACCACG
TTGCAGGTAG AAGGGATGGT CGCTTCCCAA CAGGATGCTA CCGCCTGGTC GTTGCAACAG
TTGCAGGCAT TCATCGCTGG CTGTTACGAA GGGTTGACGG CGCTGGAGCC GGCGCAGCGG
CAAGTGGTGC TGGATGACCT GCACCGCTTT GAAGAGGCTA TCCGCCAGAC GAATAGCGAA
GCCGAACTGG TGCACCTGGT CGCCGAAAAA TTGAGCACGC TCAGCAAAAC AGTCGTCGGG
AAATATGAGC CAGATGAAAG CGGTTTGCCA GCCCTGCCGC AAGACCTGCC CGAGCCTGAT
TCACCGTGTC GCGTCCCCAG CCTGCACAAC CTGTTTTTGA GCAACCTGCA GCGCATCCTG
CAAGAACTGC CGGGTCAAGA GGAGGAACCG TGA
 
Protein sequence
MEKPHLTVIS GPRQGMQVSM DVSPFTLGRG TDNTLSLPDP TISSHHARIV EHIGLYWLED 
LGSTNGTYFL PPRGEEFRLA KDKPVLLVEG ARIRLGGHTT LQVEGMVASQ QDATAWSLQQ
LQAFIAGCYE GLTALEPAQR QVVLDDLHRF EEAIRQTNSE AELVHLVAEK LSTLSKTVVG
KYEPDESGLP ALPQDLPEPD SPCRVPSLHN LFLSNLQRIL QELPGQEEEP