Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3386 |
Symbol | |
ID | 5210363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4252664 |
End bp | 4253356 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596982 |
Product | FHA domain-containing protein |
Protein accession | YP_001277695 |
Protein GI | 148657490 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0029589 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0414259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAAC CCCATTTGAC CGTAATCAGC GGTCCCCGAC AGGGGATGCA GGTTTCCATG GATGTTTCGC CTTTCACCCT GGGGCGGGGA ACAGACAACA CGCTTTCTCT GCCCGACCCG ACCATTTCCA GCCATCATGC CCGTATCGTG GAACACATCG GCCTGTACTG GCTGGAAGAT TTGGGCAGCA CCAACGGCAC ATACTTTTTG CCACCACGCG GCGAAGAATT CCGCCTGGCG AAAGACAAGC CCGTCCTGCT GGTGGAGGGC GCTCGCATCC GCCTGGGTGG TCATACCACG TTGCAGGTAG AAGGGATGGT CGCTTCCCAA CAGGATGCTA CCGCCTGGTC GTTGCAACAG TTGCAGGCAT TCATCGCTGG CTGTTACGAA GGGTTGACGG CGCTGGAGCC GGCGCAGCGG CAAGTGGTGC TGGATGACCT GCACCGCTTT GAAGAGGCTA TCCGCCAGAC GAATAGCGAA GCCGAACTGG TGCACCTGGT CGCCGAAAAA TTGAGCACGC TCAGCAAAAC AGTCGTCGGG AAATATGAGC CAGATGAAAG CGGTTTGCCA GCCCTGCCGC AAGACCTGCC CGAGCCTGAT TCACCGTGTC GCGTCCCCAG CCTGCACAAC CTGTTTTTGA GCAACCTGCA GCGCATCCTG CAAGAACTGC CGGGTCAAGA GGAGGAACCG TGA
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Protein sequence | MEKPHLTVIS GPRQGMQVSM DVSPFTLGRG TDNTLSLPDP TISSHHARIV EHIGLYWLED LGSTNGTYFL PPRGEEFRLA KDKPVLLVEG ARIRLGGHTT LQVEGMVASQ QDATAWSLQQ LQAFIAGCYE GLTALEPAQR QVVLDDLHRF EEAIRQTNSE AELVHLVAEK LSTLSKTVVG KYEPDESGLP ALPQDLPEPD SPCRVPSLHN LFLSNLQRIL QELPGQEEEP
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