| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3367 |
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| Symbol | |
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| ID | 5210344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4220651 |
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| End bp | 4222465 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596964 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001277677 |
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| Protein GI | 148657472 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0747872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACACC TTGCGACGCC AGCAACCTGG ATCGTGGCGT TGAGCCGCCA GCGCGGACCA
CTGCGGTTGT ACCAGTGGCT CTGGCTGCTG ATCTGCACAC TTGGCGCGCT GGCGATAGCA
GCGCCGCGCA TCCTCTCCCA ACCGATCCGC TATGAAACGC TGGCAACGGT GCAGATCGAT
GCCGTCGAAC GCTATCACGA GTTGTATACC GACGGTCAGC CCGACGACGA TTACCGCGCT
GTCGAGGCGC AGGCGCTCGA ACTGTTGAAA GCGCGCCGTC CCGACCTTGG CGGTCCGACC
TATGCGGTGC GCTTTGCGCC ACACTCCGAT GGGCGCATCG ACATCATCGC CACCGGTCGG
ACACCGCTCG AAGCGCAGAT GCTGGCGGAC GAAGCGGCAG AGATGCTGGC GCGCACAGTG
CGCGCAGCCG GCGGACGCGA GATTCTGCGC AATCTCATGG GATGGGAACT GACCGAAGCG
CTCCAGGGGC GTCAGCCAGA AACGACCTTC CAGCATCTGC TGCGCGAAAT CATCCGGACG
CAGGCGTTTC CGCTCAACCG GGCGGTCGAG CCGGTCTCGG CGTACATCAC TGTTGATCAA
CTGCCACGCG AAGAACTGAG CGACCTGGCG CGCGCGCTGG AAGTTCGTGA GGAACAGTTG
CGGCGTATCG ATATTCCCGC GCTGGAGATG AATCGCACGG CTGCAACCGG CGCTGCGCTC
CAGCGGATCG ATGCCGACCT GGTGCGCCTG ACGGCGGGAA AACAGGCGAT CCGTGATGCG
CTCGCATACC TGTATCGCAA CCTCAGCGCC GCCTTCGCCC CCGATGCACC CAGCGACGCC
TACCGCGCGA TCCGGGCGCC GCTGCCGGAA CGCGCCGTTG ATCGCCGCAT CCCGCTGCTC
CTCTCGGTGG CAACGCTGGT CGGGCTGGTC TTCGGCGCAG CCGGTGTGGC AGTGGATCGC
AGCGCTGGCG TCATGCGCAA AATCCTGGAA CTCTGGGCAT ACCGCGAATT GATCCGCAAC
CTTGTGATCC GCGATTTGCA GGTTCGGTAT AAAGGCAGCG CGCTTGGCTA TCTCTGGACG
CAACTGGCGC CTCTGCTGCT CATGCTCGTC TTCTGGTTCG TCTTCAGCGC CTTCTTCCAG
GCGGACATCG CCATGTTCCC AGTGTTCCTT CTGGTCGGTC TGTTGCCGTG GAACTTCGCC
AGCGAAGCGG TGAGCGGCGG CACACGCAGT GTGATCGACA ATGCGGCGCT GGTCAAGAAG
GTGTTCTTCC CGCGTGAGGT ACTGCCGCTC GTCTCCGTCC TTTCCAGCCT GGTCAACTTT
GTGCTGTCGC TGCCGATGCT TCTGCTGGTC ATGGCGGCAG TTCAGGCAAT GTACGCACCT
TTGCGCGCAA CGGGCAACTG GACGAACTTT TCGTGGACGT TCGTCTATCT GCCGGTGTTG
ATTGGCATTC AGACGCTCTT TCTGGCGGGG GTGGCGTTGT TTCTCAGTGC GCTGGCGGTG
CGCTACCGCG ATACCGTTCA CCTGATCGGC ATCTTCATTC AGTTCTGGTT CTTCCTCACA
CCGGTCATCT ATGCGCTTGA TCGGGTTGCC GGTCCGCTGG TGCAACTGGT GCGCTGGCTC
AACCCGATGG CGTCGCTGGT TGAGTTTTAC CGCGAGATTC TGTATGGAAA CGCTGTCGCC
TTTGGTCAGA TTCCGACCCC GAACCTCCCT GCCCTCGATA GTGTGCTGCG TGTTCTGTTG
ACCGCCCTGG CGACTCTGGC GATTGGCTAC TGGTATTTCC AGCGTCGCAG CGGTGAGTTT
GGCGAGCGGT TGTAG
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| Protein sequence | MAHLATPATW IVALSRQRGP LRLYQWLWLL ICTLGALAIA APRILSQPIR YETLATVQID
AVERYHELYT DGQPDDDYRA VEAQALELLK ARRPDLGGPT YAVRFAPHSD GRIDIIATGR
TPLEAQMLAD EAAEMLARTV RAAGGREILR NLMGWELTEA LQGRQPETTF QHLLREIIRT
QAFPLNRAVE PVSAYITVDQ LPREELSDLA RALEVREEQL RRIDIPALEM NRTAATGAAL
QRIDADLVRL TAGKQAIRDA LAYLYRNLSA AFAPDAPSDA YRAIRAPLPE RAVDRRIPLL
LSVATLVGLV FGAAGVAVDR SAGVMRKILE LWAYRELIRN LVIRDLQVRY KGSALGYLWT
QLAPLLLMLV FWFVFSAFFQ ADIAMFPVFL LVGLLPWNFA SEAVSGGTRS VIDNAALVKK
VFFPREVLPL VSVLSSLVNF VLSLPMLLLV MAAVQAMYAP LRATGNWTNF SWTFVYLPVL
IGIQTLFLAG VALFLSALAV RYRDTVHLIG IFIQFWFFLT PVIYALDRVA GPLVQLVRWL
NPMASLVEFY REILYGNAVA FGQIPTPNLP ALDSVLRVLL TALATLAIGY WYFQRRSGEF
GERL
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