| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3366 |
|---|
| Symbol | |
|---|
| ID | 5210343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4218910 |
|---|
| End bp | 4220532 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640596963 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001277676 |
|---|
| Protein GI | 148657471 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.261921 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGGGG TAAGGAATGC GCAGGCGCGG ACGCACACTA CCTGGCAATT CCATCCAGGC
GATTATCTGG TTGTTGCAAT CTTTATCTGC ACAACCGTAG TTATGATGTA TGCAGTGCTT
GAGTCGCCGA CATCCTTGCT GCTCGGTTGG GCGGGCGACA ACATTCAGTA CGTTTATGCC
GCCGGATGGA TTGCTGAAGC GCTGCGCACC GGCGCTTCAC CGTTTGTCGA CCCGCGCATC
AATCCCCCGG AAGGATTGGC GCTGACCGCC ACCGATGTGC CATACCTGGG ATATATGGTA
GTTGCACCAC TGACGTGGAT ATTCGGACCC GTGTTCGGAT ATAATGCGCA CCTGGCGCTC
GCTCACTTCC TTTCGGGTCT GTGCGCATAC CTGTGGGTGC ATCGTCTGAC CGGCAGTCGC
ACTGGCGGGT TAGTTGCTGG CCTGGCATTC ATGCTGGCGC CGTTTCGCCA CGCTCATAGC
TACGGTCATC CGCAGATTGT GAGCACATAT CCACTCCCGT TATTCTTTTG GGCGCTCGAT
GCCTCGCTCC GATCACAACC GGATCGTAAG GCGCTGGCAG GTCTGGCAGG GGCAACCTTC
CTGCTCGGCG CAGCATCGCA GTATTACCTT GTTATTGGTT TACTCTGCGG TCTTGTGTAT
GCGCTATTGA CGTTCGTGAC CCGACGGTTG AATCCACTGC GTGGCGCGTG GCTCGCAGCG
CCAGCAGTAC TGATCGGTGC ATTATTTGCG GCAACCCCTT ATCTGATGAT AGCACAGGAA
GGAACCTACA ATACTTATAC TACTGAAAAA ACACGAATGT GGTCAGCCAG CCCGATGAAC
TTCATCGTGC CATACCATCT GCATCCACTC TGGGGAACGC TTGTCGAGCA GTTGCGGCCT
GAAACGTTGT GGGTTGAAAA AACGCTCTAT GTTGGACTCG TCCCCGGAGT GCTGGCGCTG
GTAGCATTGC GTACCTTTGA ACGCCGGTTT GTCTGGGTCG GAACCGGTTT ATTTGCGTTT
ATCCTGGCAC TCGGCACCGA TCTGCACACC GGCAATATAC CGCTGCAACC GGATCGTCCG
ATCTGGTTGC CGGCATATTA TCTGCATCAA CTGCCGATCA TCGGTCTTAT GCGTGTTTGG
GCGCGCTTTG GGGTTGTAAC CATTCTTTTT GTTGCTTTGC TGGCAGGTGT AGGAGCGGCA
CAATTGACAC ATCGCAGTAA AGAGGCGTCA CGATTCGGGG ATCATACTCT CAAACATCGA
CGTTCGCTCC TTCTCGCCCC ATTGATCATT TTGCTTGTAG CGCTCGATCT GAGCCCGATC
TACAGAACCA CTGATCGCAT AACGCTGGCG CCTCGTCCGA TTGACATCTG GCTTGCACAA
CAACCAGGCG ATTTCATTAT CGGGTTTGAA CCGGTTATTG ATGACAAAAT CAACTATTAT
ATATATTCTG TTCGGCGCCC TGATTCATGG GAAGCAAACG TTCGCATTCA TGCATCAGGC
GCATATGCCA TCCGTCTTTC AGGATTTCAA CGAGCGCTCA CGCGGCTTTC CCGACAGTGC
TTCCGCTCAA CGATTGCGCG ACCTGGGGAT ACGCTATCTG CTGCTGGAAA AACATATGTT
TGA
|
|---|
| Protein sequence | MVGVRNAQAR THTTWQFHPG DYLVVAIFIC TTVVMMYAVL ESPTSLLLGW AGDNIQYVYA
AGWIAEALRT GASPFVDPRI NPPEGLALTA TDVPYLGYMV VAPLTWIFGP VFGYNAHLAL
AHFLSGLCAY LWVHRLTGSR TGGLVAGLAF MLAPFRHAHS YGHPQIVSTY PLPLFFWALD
ASLRSQPDRK ALAGLAGATF LLGAASQYYL VIGLLCGLVY ALLTFVTRRL NPLRGAWLAA
PAVLIGALFA ATPYLMIAQE GTYNTYTTEK TRMWSASPMN FIVPYHLHPL WGTLVEQLRP
ETLWVEKTLY VGLVPGVLAL VALRTFERRF VWVGTGLFAF ILALGTDLHT GNIPLQPDRP
IWLPAYYLHQ LPIIGLMRVW ARFGVVTILF VALLAGVGAA QLTHRSKEAS RFGDHTLKHR
RSLLLAPLII LLVALDLSPI YRTTDRITLA PRPIDIWLAQ QPGDFIIGFE PVIDDKINYY
IYSVRRPDSW EANVRIHASG AYAIRLSGFQ RALTRLSRQC FRSTIARPGD TLSAAGKTYV
|
|---|
| |