| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3360 |
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| Symbol | |
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| ID | 5210337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4211807 |
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| End bp | 4213288 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640596958 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001277671 |
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| Protein GI | 148657466 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCA CCGATGTGTT GACCGACCTG CGACGTGTCG TTGGACCGCG CGCCGTCATC
GATGACGCTG CCACGCTGCT GACCTATGAG GCGGATGGGT GTGTACTGGA TACGCATCCG
CCCAACGTTG TCGTGCTGCC GGCAACAACC GAGGAAACTG CGGCAGTCGT GCAGATCGCC
AACCGCGCCG GGATGCCGAT CGTACCGCGC GGTGCAGGCA CCGGTCTGTC TGGCGGCGCG
ACGCCGATCC ACGGCGGGAT TGTGATCTCG ACGGCGCGGA TGGAACGGGT GCTGGAAGTG
GATGTGCGCA ATCGACGGGC ACGGGTGCAA CCGGGGGTGA TCAACTGGGA ACTGTCGCAG
TACCTGGGAC AGTACGGGTA TGCGTTCATG CCCGACCCAT CCTCCCAGAA GGCGTGCACC
ATCGGCGGCA ACATTGCCAA CAATAGTGGC GGACCACACT GCCTCAAGTA TGGACTGACG
ACCAACCACG TCCTGGCGCT GCGCGTGGTG CTGCCCGATG GCAGTGTGAT CTGGACGGGT
GACGGGCGGC AGGATGGCAT CGGCTATGAC CTGGCAGGTG TGTTGACCGG CAGCGAGGGA
ACGTGCGGCA TCATTACCGA GGCATGGGTG CGAATGACGC GCCTGCCGGA AGCGTTGCGC
GTGGTGCTGG CGCTGTTCCC GGACATTCCA TCGGCGTCAC AGACGGTTTC GACGGTTATT
GCGCGCGGGT TTCTGCCAGC TGCGCTGGAA ATGATGGATC ACCTGGCGAT CCGCGCTGTG
AACGGCATGT ATCGCCTGGG ATTGCCTGAG AGCGCCGGAG CGGCGCTGCT GATCGAACTT
GACGGCGTCA ACGATGGGCT GGACGACCTG CTCGCCGAAA TTACCGGCAT CTGCCGCGAT
CTCGGCGCGA TGGAGGTGCG TCCGGCGAAA ACCGCTGCTG AACAGGCGCA GGTCTGGGCT
GCGCGCAAAA ATGCATTTGG CGCTATGGGA CGCCTGGCAC CAACGTACTA CCTGGTCGAT
ACGGTTGTGC CGCGCACGCG CCTGCCGGCG ACGCTGGCAC GCGTCGGTGA GGTGTCGCGC
GATTACCGCC TGCCGATTGC GAATGTCTTT CATGCGGGCG ATGGCAACCT GCATCCGCTC
ATTCTGTTCG ACCGACGCGA CAAGGGGCAA CTCGAACGTG CGCTTCTTGC CGCTACCGAC
ATTCTGCGCG AGTCGATCAA TCAGGGCGGA GTGATCAGCG GCGAGCACGG GATTGGCGTC
GAAAAGCGCG ATTACATGGA TCTGCTGTTT ACCACCGACG ATCTGGCAGC GATGGCCGGT
CTGAAGCGCA GTTTCGATCC GCGTGAAATC TTCAATCCCG GCAAGATTTT CCCGAAAGGG
GTCGGATGCG GCGAACTGGC TGCACTGCGC CGACGTGGCT TGCCAGCCGC TGAACTGATC
GGCGCAGACA CGGGCAGCGT GTCGTCAGGA ACGTGGTTGT GA
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| Protein sequence | MNRTDVLTDL RRVVGPRAVI DDAATLLTYE ADGCVLDTHP PNVVVLPATT EETAAVVQIA
NRAGMPIVPR GAGTGLSGGA TPIHGGIVIS TARMERVLEV DVRNRRARVQ PGVINWELSQ
YLGQYGYAFM PDPSSQKACT IGGNIANNSG GPHCLKYGLT TNHVLALRVV LPDGSVIWTG
DGRQDGIGYD LAGVLTGSEG TCGIITEAWV RMTRLPEALR VVLALFPDIP SASQTVSTVI
ARGFLPAALE MMDHLAIRAV NGMYRLGLPE SAGAALLIEL DGVNDGLDDL LAEITGICRD
LGAMEVRPAK TAAEQAQVWA ARKNAFGAMG RLAPTYYLVD TVVPRTRLPA TLARVGEVSR
DYRLPIANVF HAGDGNLHPL ILFDRRDKGQ LERALLAATD ILRESINQGG VISGEHGIGV
EKRDYMDLLF TTDDLAAMAG LKRSFDPREI FNPGKIFPKG VGCGELAALR RRGLPAAELI
GADTGSVSSG TWL
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