Gene RoseRS_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3356 
Symbol 
ID5210333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4207569 
End bp4208774 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content61% 
IMG OID640596954 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001277667 
Protein GI148657462 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTTT CGATATGCGA CGATACGCCT GAAACCATTG CCTGCCAGGG CGTCCTCGAT 
GCAATCAATG CCCAGATTGC AGTGCTTGAC CGGCATGGGG TCATCGTCGC GGCGAACCGG
GCATGGTTGC GTTCGGTTGC GGCGAAGAGC GATGATCACC TGTTCCGGAT TGGCACGAAC
TACCGCGACG CCTGGAACGA CGACCGGAGC ATCTTTGCCA GGGTAGCGCG GGAAGCGCCG
GAGGGCATCG CGGCGGTGCT GCGCGGCGAG TGCGCCTGTT TCACGTACGA ATACCGCCGC
GAGACGGACG ATGGCGAACG CTGGTTTCGC CTGGAAGCGA CAGCGCTGAA ACAGGGCGGG
GCGGTGTTGA CCAACACCGA CATTACTGCG CACCAGGTTC AAGCTCTACT GACCCGCTTG
CGCGAACAGA ACCAGCGTCT TCAGAGTCGG ATGCGGCGGC GGCAGCGGCT CACCCGCGCT
CCGCGGCAAT CGCTGCGGCT GCTCATCGAA CAGACAACAC GCCTGGCGCG CGCCAATGCC
GAATTGCAGC AATTTACCTC GGTTGTCTCG CACGAACTGC GCGAACCGTT GCGCATGGTC
ACCGGTTTTC TGGATCTGCT CCAGCGCCGG TATGGTGATC AACTCGATGA ACACGCTCGT
GAGTATGTTT CTTTCGCATA TGACGGCGCC GCGCGGATGC AATCGCTCAT CGAAAAACTG
CTGGCATATG CCCGTCTCGA TCAGCATCGT CCGGATATAC GCCCCGTCGA TTGCAACGAT
GTGCTGGCGC GCGCCATCGG CATGTTGCAG ATTGCTATCG ATGAACATCA GGCGGAGATC
ACCTTCGATC CGCTGCCGAC GGTGGCAGGC GATGATGTCG AACTCGGACT GGTCTTCCGC
AACCTGCTCA GCAATGCCAT CAAGTTCCAC GGCGACGAGC GACCGCGCAT CCATATCGGG
GCGCAACGCC AGAAGAATGA GTGGCTCTTC ACCGTGCGCG ATCACGGGAT CGGCATTGCT
GCGGAAGATA CCAGACGCAT CTTTGATATG TTCGTTCGCA CCCATAGCCG CAGCCGGTTT
CCCGGCAACG GCATCGGGCT GGCGATCTGC CGCAAGGTGA TCACCCGCCA TGGGGGGCGG
ATCTGGGTCG AACGTCCGGC GGATGGCGGG TCGCTGTTCT GCTTTACGTT GCCGGCGCTG
TCGTAG
 
Protein sequence
MIVSICDDTP ETIACQGVLD AINAQIAVLD RHGVIVAANR AWLRSVAAKS DDHLFRIGTN 
YRDAWNDDRS IFARVAREAP EGIAAVLRGE CACFTYEYRR ETDDGERWFR LEATALKQGG
AVLTNTDITA HQVQALLTRL REQNQRLQSR MRRRQRLTRA PRQSLRLLIE QTTRLARANA
ELQQFTSVVS HELREPLRMV TGFLDLLQRR YGDQLDEHAR EYVSFAYDGA ARMQSLIEKL
LAYARLDQHR PDIRPVDCND VLARAIGMLQ IAIDEHQAEI TFDPLPTVAG DDVELGLVFR
NLLSNAIKFH GDERPRIHIG AQRQKNEWLF TVRDHGIGIA AEDTRRIFDM FVRTHSRSRF
PGNGIGLAIC RKVITRHGGR IWVERPADGG SLFCFTLPAL S