| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3352 |
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| Symbol | |
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| ID | 5210329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4202967 |
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| End bp | 4204382 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596950 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001277663 |
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| Protein GI | 148657458 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.695645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGT TTCGTTTCTC GCGAAGCGGC GCCAGCAATG CACACCAGGC GCCCAACGCC
ACCCCCGTCG ATGAACCGCG CCCGCCGATT GAGCCGGTGC GACCGGTCGT AGCGCGGTCG
TCGGTTCCTC CGACCGCACA CGATGCCGAT CGCGATGAAC GCGATCTGAT CGAAGTGGTT
CAGTCAAAGT TGATCGATGA GACTGATACG AGCGGGCGCC GTGAACCGGA GTACTACGCG
CGCCGTATCG CGGAACTGGT GACCGAGCAC CTCGACAGGA GCGGTCGCGT AGTTTCCGAA
CGGGAACGCA TGCGTCTGAT CCGCCTGGCG CAGTCCGAAC TGCTTGGACT CGGTCCACTC
GAACCGTTGC TCGCCGACGA TACGATTAGC GAGATCATGG TCAACGGTCC ATACCAGATC
TGGGTCGAGC GCAACGGCAA ATTGCAGGAA ACCGACGCCC GTTTTATCGA CGAAGACCAT
GTGCGGCGCA TCATTGATCG CATTATCTCA CCGCTCGGTC GTCGGTGCGA TGAGACGACG
CCGATGGTCG ACGCGCGTCT GCCGGACGGG TCGCGCGTCA ACGCCATCAT TCCGCCGCTG
GCGCTCAATG GCAGCACGAT CACGATCCGC AAGTTCTCGC GTGTTCCGCT CACCGCTGCC
GATCTGGTGG CGCGTGGCGC TGCGTCGCCA GAGTTGATGG ACCTGCTGCG AGCATGTGTG
CTGGGACGGC TCAACTGCAT CATTTCCGGC GGCACCGGCA CCGGCAAGAC CACCATGCTC
AATGTGCTCT CATCGTTCAT CCCCGACGAT GAGCGCATCA TCACCATCGA AAACGCTGCC
GAACTGCAAC TACAACAGCG TCATGTCGTG ACGCTCGAGT CACGTCCCGC CAATATCGAA
GGGCGCGGCG AGGTGACGCT GCGTGATCTG GTCGTGAATG CCCTGCGTAT GCGCCCGGAT
CGGATTATCG TCGGCGAGTG TCGCGCGGGT GAGGCGCTCG ATATGCTTCA GGCAATGAAC
ACCGGTCACG ACGGTTCGAT GACGACGCTG CACGCCAACA GTCCGCGTGA TGCGCTGCGC
CGCATGGAGA CGATGGTCAT GATGGCGGGG ATGGACCTGC CGCTGCGCGC GATCCGCGAA
CAGATCGCTT CGGCGATCAA TATCATCATT CAACTTGAAC GTCTCCAGGA CGGCTCACGC
AAGATCGTGC AGGTCTGTGA AGTGACTGGC ATGGAGAATG ATGTCGTCTC GCTCTCCGAT
CTGTTCGTGT TCCAGCAACA GGGCGTGCGT GACGGCAGGG TCGTCGGTCG AATCGTGCCG
ACAGGTATTC GCCCGCGCTT CCTCGAGAAG TTGCAGCAGA TGAACATCAC GTTGTCGCCC
CAGGTGTTTG GCAATGTTAT TCCAGGCGTT CGCTAG
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| Protein sequence | MNRFRFSRSG ASNAHQAPNA TPVDEPRPPI EPVRPVVARS SVPPTAHDAD RDERDLIEVV
QSKLIDETDT SGRREPEYYA RRIAELVTEH LDRSGRVVSE RERMRLIRLA QSELLGLGPL
EPLLADDTIS EIMVNGPYQI WVERNGKLQE TDARFIDEDH VRRIIDRIIS PLGRRCDETT
PMVDARLPDG SRVNAIIPPL ALNGSTITIR KFSRVPLTAA DLVARGAASP ELMDLLRACV
LGRLNCIISG GTGTGKTTML NVLSSFIPDD ERIITIENAA ELQLQQRHVV TLESRPANIE
GRGEVTLRDL VVNALRMRPD RIIVGECRAG EALDMLQAMN TGHDGSMTTL HANSPRDALR
RMETMVMMAG MDLPLRAIRE QIASAINIII QLERLQDGSR KIVQVCEVTG MENDVVSLSD
LFVFQQQGVR DGRVVGRIVP TGIRPRFLEK LQQMNITLSP QVFGNVIPGV R
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