| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3350 |
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| Symbol | |
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| ID | 5210327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4201053 |
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| End bp | 4201982 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596948 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001277661 |
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| Protein GI | 148657456 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCTTA TCCCTGGCAT CATAACCGCG CTTGCCATTC TTCTGGTGGT TGCAGGTCTG
ACGACTGTGC GTCGCGATGT GACCGTTGGC GAACGCCTCG ACGCCTACCT CAGCCCGACG
GTCGAGAAGA TGAATCCCAC ACCATCGCTG GAGGCAACGA AGCCGTTTGC CGAGCGTGTG
GTCATTCCGC TGCTGAAACG GGCTGCACGC GCATTTGCAT GGCTCTTGCC GCAGAATCGC
TACGAAGCGT TGCGGTTGCG TCTGGCAATG GCGGGGTACC CGTGGGGCGT CACTGCCGCC
GATTTTGTTG GCGCGAAAGG GATCGTCCTG GTGCTGGTCA CACTGGTTGC GGGCGCTTTC
GGTTGGATGG CTGGCGCAGC GCCGACATTC TTCAACCTGC TCCTGCTCGG CGGGATCGGG
TTCTGCGCCT TCTTTCTCCC CGATGTCTGG CTATCGCGCA GGATCCGGCA GCGCCAGACC
GAGTTGCTCA ATGCGCTGCC CGATGCGCTT GATCTGCTGG CGATCGCCTC TGCCGCCGGT
CTCAGTTTCG AGAGCGCAAT GCAGGAGATT ACGTCCAAAT GGACGAACGA ACTGGCGCGG
GAGTTCAGTC GGGTGTTGCG GGATATGTCG ATGGGGGTGC CGCGTCGTCA GGCGTTGACC
GATATGGCGG AACGAACTGG CGTGTCGGAC ATTGCCAGTT TCGTCTCGGC GGTCAAGCAG
GCGGAGGCGC TCGGTATCAG CATTGGTCGC GTCCTGACAG TGCAGGCTGA CGAGATGCGC
ACGCGTCGGC GGCAGCGCGC CCAGGAACGC GCCAATCAGG CGCCGGTCAA GATGATGTTT
CCGCTCGTCT TTCTCATCTT TCCGGCAATT TTTGCCGTGC TATTGGGTCC GGCAGTGCCG
CAACTGCTGG AAGCATTTGG TGGCGTATGA
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| Protein sequence | MLLIPGIITA LAILLVVAGL TTVRRDVTVG ERLDAYLSPT VEKMNPTPSL EATKPFAERV
VIPLLKRAAR AFAWLLPQNR YEALRLRLAM AGYPWGVTAA DFVGAKGIVL VLVTLVAGAF
GWMAGAAPTF FNLLLLGGIG FCAFFLPDVW LSRRIRQRQT ELLNALPDAL DLLAIASAAG
LSFESAMQEI TSKWTNELAR EFSRVLRDMS MGVPRRQALT DMAERTGVSD IASFVSAVKQ
AEALGISIGR VLTVQADEMR TRRRQRAQER ANQAPVKMMF PLVFLIFPAI FAVLLGPAVP
QLLEAFGGV
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