Gene RoseRS_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3344 
Symbol 
ID5210321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4194207 
End bp4194992 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID640596942 
Productsilent information regulator protein Sir2 
Protein accessionYP_001277655 
Protein GI148657450 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.460999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAAA CAGGTATAGA TCAGGCAGCG ATCAGGCACG CCGCCGATCT CCTCGGTCGT 
GCGCACAGCG CCGTTGCCAT CACCGGCGCG GGCATCAGCA CTCCCTCCGG CATCCCCGAT
TTTCGCGGTC CCGACGGCGC ATGGAAGCAT GTCGATCCGT CAGAAGTCGC GTCGTTGCAC
AACTTTCTGC GCAATCCGCG TGCATTTTAC GACTGGTTCC GACCTTTGCT CGATCGTGTG
CTGGCGGCTG CACCCAATGC GGCGCATTAC GCCCTGGCAG CGCTCGAACA GCACCGGACG
CTCAGAGCCA TCATTACGCA GAACTTCGAC GGGTTGCATC AGCGCGCCGG GTCGCGTGAA
GTCTATGAAC TGCACGGGCA TCTGCGCACC GCCACATGCC TGGAGTGTGA GCGACAGATT
CCGACCCAGG CGTTGTTGCC CAGGATCCGT CGTGGGGAAC CGCCGCGTTG CTCCTGCGGT
CATCCGCTCA AACCCGATGT GGTACTGTTC GACGAGATGC TGCCGCGTGG ATTGTACTGG
CTGGCGCGGC GCGCCGTCGA GCATGCCGAT GTTATCATCG TCGCCGGAAC ATCGCTCGAG
GTGTTCCCCG TCAACGACCT GCCCGCGCTG GGCTTGCGCC ACGGTGCAAA ATTGATTATC
ATCAACAATG GACCAACATA TCTGGATGGG CGCGCCGAGG CGGTCATTCG CGGCGATGTG
GCGATTGCGC TGCCAGAACT GGTGAGACAG ACCACCGGTG CGCACCTTCT CGAACGATCA
CGATAA
 
Protein sequence
MVETGIDQAA IRHAADLLGR AHSAVAITGA GISTPSGIPD FRGPDGAWKH VDPSEVASLH 
NFLRNPRAFY DWFRPLLDRV LAAAPNAAHY ALAALEQHRT LRAIITQNFD GLHQRAGSRE
VYELHGHLRT ATCLECERQI PTQALLPRIR RGEPPRCSCG HPLKPDVVLF DEMLPRGLYW
LARRAVEHAD VIIVAGTSLE VFPVNDLPAL GLRHGAKLII INNGPTYLDG RAEAVIRGDV
AIALPELVRQ TTGAHLLERS R