Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3344 |
Symbol | |
ID | 5210321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4194207 |
End bp | 4194992 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640596942 |
Product | silent information regulator protein Sir2 |
Protein accession | YP_001277655 |
Protein GI | 148657450 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.460999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGAAA CAGGTATAGA TCAGGCAGCG ATCAGGCACG CCGCCGATCT CCTCGGTCGT GCGCACAGCG CCGTTGCCAT CACCGGCGCG GGCATCAGCA CTCCCTCCGG CATCCCCGAT TTTCGCGGTC CCGACGGCGC ATGGAAGCAT GTCGATCCGT CAGAAGTCGC GTCGTTGCAC AACTTTCTGC GCAATCCGCG TGCATTTTAC GACTGGTTCC GACCTTTGCT CGATCGTGTG CTGGCGGCTG CACCCAATGC GGCGCATTAC GCCCTGGCAG CGCTCGAACA GCACCGGACG CTCAGAGCCA TCATTACGCA GAACTTCGAC GGGTTGCATC AGCGCGCCGG GTCGCGTGAA GTCTATGAAC TGCACGGGCA TCTGCGCACC GCCACATGCC TGGAGTGTGA GCGACAGATT CCGACCCAGG CGTTGTTGCC CAGGATCCGT CGTGGGGAAC CGCCGCGTTG CTCCTGCGGT CATCCGCTCA AACCCGATGT GGTACTGTTC GACGAGATGC TGCCGCGTGG ATTGTACTGG CTGGCGCGGC GCGCCGTCGA GCATGCCGAT GTTATCATCG TCGCCGGAAC ATCGCTCGAG GTGTTCCCCG TCAACGACCT GCCCGCGCTG GGCTTGCGCC ACGGTGCAAA ATTGATTATC ATCAACAATG GACCAACATA TCTGGATGGG CGCGCCGAGG CGGTCATTCG CGGCGATGTG GCGATTGCGC TGCCAGAACT GGTGAGACAG ACCACCGGTG CGCACCTTCT CGAACGATCA CGATAA
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Protein sequence | MVETGIDQAA IRHAADLLGR AHSAVAITGA GISTPSGIPD FRGPDGAWKH VDPSEVASLH NFLRNPRAFY DWFRPLLDRV LAAAPNAAHY ALAALEQHRT LRAIITQNFD GLHQRAGSRE VYELHGHLRT ATCLECERQI PTQALLPRIR RGEPPRCSCG HPLKPDVVLF DEMLPRGLYW LARRAVEHAD VIIVAGTSLE VFPVNDLPAL GLRHGAKLII INNGPTYLDG RAEAVIRGDV AIALPELVRQ TTGAHLLERS R
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