Gene RoseRS_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3339 
Symbol 
ID5210316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4188053 
End bp4188883 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content60% 
IMG OID640596937 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_001277650 
Protein GI148657445 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0682] Prolipoprotein diacylglyceryltransferase 
TIGRFAM ID[TIGR00544] prolipoprotein diacylglyceryl transferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCTC CTGTTGATCC GGTCATTATT CAACTCGGTC CGCTGACGCT GCGCTGGTAC 
GGCGTGCTGA TCATGACAGG CGTGATGCTG GCAGCGTGGG TCGGTTCCCG CCATATTGAG
CGACGTGGGT TCGACCGCGA CTCGGTGTGG GACCTGTTGC TCTGGGTGTT GATTCCGGGG
TTGATCGGTG CGCGCCTCTA CTATGTGTTC ATCCAGTCGC CGCGCGGACC GGAAGGGTTG
GGGCGCTTTC TGAGCAATCC GGCGAGCATT CTCGCGGTAT GGGAAGGGGG GTTGCACATC
TTTGGCGGGT TCATCTTTGG CGCGCTTGGA TTATGGGCGT TTGCACGTAT GCGGAAGGCG
CCGCTCCTGG TGTATGCCGA CGCGATTGCG CTCGGTCTGC CGCTGGGACA GGCGATTGGT
CGGTGGGCAA ACTTCATCAA CCAGGAACTC TACGGTCCGC CGACGACCCT GCCGTGGGGG
TTGCGCATCG ACGCCGAACA TCGCATCGGT CCGTACCGCG ATCTTGCAGC GTTCCCGGAA
ACGACCCGCT TCCACCCGCT TTTTCTGTAC GAATCGCTCT GGAACCTGAT CGGCTTTGCG
GTGATCTTTT CCATCTGGCG TCGCTACGGC GGCCGCCTGC GCGATGGCGA TGTACTGCTC
ATGTACCTGA TCTGGTATCC GCTGGGGCGA TTCTTCATTG AGTTCCTGCG TACCGATTCG
TGGTTTTTCC CCGGAACGCC GTTCAACGTC GTGCATGTTC TTTCGTTCGC CGCTATCGTC
GGTGCGGCTG CGCTGCTCTA CCGAAGGCAT GGTCAGAGGC AAGAGGCGTG A
 
Protein sequence
MYPPVDPVII QLGPLTLRWY GVLIMTGVML AAWVGSRHIE RRGFDRDSVW DLLLWVLIPG 
LIGARLYYVF IQSPRGPEGL GRFLSNPASI LAVWEGGLHI FGGFIFGALG LWAFARMRKA
PLLVYADAIA LGLPLGQAIG RWANFINQEL YGPPTTLPWG LRIDAEHRIG PYRDLAAFPE
TTRFHPLFLY ESLWNLIGFA VIFSIWRRYG GRLRDGDVLL MYLIWYPLGR FFIEFLRTDS
WFFPGTPFNV VHVLSFAAIV GAAALLYRRH GQRQEA